Kosakonia sacchari: C813_25515
Help
Entry
C813_25515 CDS
T03601
Name
(GenBank) type IV secretion protein Rhs
Organism
ksa
Kosakonia sacchari
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
TEN_YD-shell
DUF6531
RHS
OCRE
DUF4595
Motif
Other DBs
NCBI-ProteinID:
AIA25190
LinkDB
All DBs
Position
complement(4524985..4529127)
Genome browser
AA seq
1380 aa
AA seq
DB search
MHSGAHFDPQLGLDIHTYPWPLPTPHIGIVFDVFDYLPLIGTTVHVNSIKRASAGTGGIA
VHIPVGGVWVPPLRAPGGPQIEDELFMGSKTVSVDGEPFSRIGMPVLSCNIIGLVPPFRL
KRATKPKPLSLTLPLTFNLAIPNNVLVGGPPTINLMALLMRAGLSGLGKGFKKLKKTPKW
RLFMRRFRKLRQKLFRNMDSGFLKCRVLRAEPVDIRDGSVSLEQQDFLLAGRLPLAWTRT
YSSADIEVEGLCGFGWSTPADIRLDVLAEEGVAMLTKPEGMTLFAALPQNDGREHAINGL
PEGSRLWRETRDGEVLWVVDQESGPQLHFNGKQGALPIGEIVDRSGNGWRFKREEGELRK
IREFTHAGMTGRDILVTQERNRLHTLRLHNALDGEVTPLTRYEYDTYGQLSAEIDTLSHP
RRFVYQQRRMVSHIDRNGQGFHYQYNEAWQVIHAWGDGGVWDYHFAYHALLNEVEVTDSQ
GAVSRITFDEHGLPVSEIDPLGGNTVFRYDDFGRTVEVTEPDGNTHRWEYDEQGRMTAEQ
MPDGCVIQAVYDDDGQLLALTDEKGAVWRSEYSEAGNLTREIDPTGVATSYEYDAFGQLC
AANVPGISPTRYQYDRYGFPQRIEQAGAGAIQLRHSVRGTLLERIDESGGTTRFHWDMKD
RLVATTDPAGGEIRVVYDREDDPVSYTDELGRTTQLRYNGSGMLTACETPDGATLSFLYD
AEDRLVTVVNQNGQRWQLTRDALGRVTEEHDYWGQVTRYGWDKASRLIRREDPLGREVRY
GYDKRGRLTERRSGDTLQVKYHYDPCGRMVLCENPWRRLSWRYDDAGRVLLEEQDGFQLR
YGYNERGVLLKRESDSGHQVRYHLDAHERLSQIQLNDDVPILFTYDEAGRCVSEQLSNDV
LRTFSFDRLGRLSTQQVLQQDLPLFASGFAYDRAGNLTLREDSLWGSDRYSYDPVGRLTA
HTAPDGALRQFVQDAAGNQLQTQTHEVNDSAGGWFREGIHHGVRYVFDRAGELRQRRDIQ
SEGEKEDFVWDDNRQLIAVRKGDSLVRYGYDGLGRRVFKQTASETRWFYWQDDVLAGETV
TKLQEPLAALSIFDTGGRLKRQKAQAKLFSEMREYVYYPDSFWPLALLTQEGGEKQSWHY
HCDPNGAPVRLTSPQGEIVWSEKSGIWGEKGEVYASRIDNPLRFQGQYYDVETGLHYNRY
RYYDPNIAAYISQDPVGMVAGVSVYQYAPNPLAWSDPLGLQRCLGLPSTRPPGGSRKKYN
RAKGQGLYILHENGKIRYVGRGDAPTRLNAHAKTPGKSHLEQLIIFDNNLTKAEAKYLEE
KLIGMHGGAKSMNPLTNLLNDIRSYRPGNKNAPTYKIAGDSSAWGKEILQDALSIIRGSI
NT seq
4143 nt
NT seq
+upstream
nt +downstream
nt
atgcactccggcgcgcacttcgatccgcagctcgggctggatattcatacctacccgtgg
ccgctgccaacgccgcatatcggcattgtttttgacgtgttcgattacctgccgctgatt
ggcaccacggtgcacgtcaacagcattaagcgtgcgagtgcaggaacgggcggcatcgcg
gtgcatattccggtcggcggtgtgtgggtgccgccgctgcgcgcgccgggcggcccgcag
attgaagacgagctgtttatgggcagcaaaaccgtctcggtggacggcgagccgttctca
cgcatcggtatgccggtgttgagctgcaacattattggcctggtgccgccgtttcgcctc
aagcgcgccaccaagccaaaaccgctctctctcacgctcccgctcaccttcaacctcgcc
atacccaataacgtgctggttggcggcccgccgaccatcaacctgatggcgctgctaatg
cgcgccgggttaagcgggctgggcaagggcttcaagaaactgaagaaaacgccgaagtgg
cggctgtttatgcgccgctttcgcaagctgcgccagaagctgtttcgtaatatggactct
ggcttcctcaagtgccgcgtgctgcgcgctgaaccggtggatattcgcgacggcagcgtc
agcctggaacagcaggatttcctgttagcgggccgtctgccactggcgtggacgcgaacc
tattcgtcggcggatattgaggtcgaagggctgtgcggctttggctggtcaaccccggca
gatatccgcctcgatgtgctggcggaagagggcgtcgcgatgctgacgaagccggaaggg
atgaccttattcgccgctctgccgcagaacgacgggcgcgaacatgccattaacggtttg
cctgagggcagccgcttgtggcgggaaacccgtgatggcgaagtgctgtgggtagtggat
caggaaagtggcccgcagctgcactttaacggtaagcagggcgcgctgccgattggcgaa
attgtcgatcgtagcggcaacggttggcgatttaagcgggaagagggcgagttacggaaa
attcgcgagtttacccatgctgggatgaccgggcgcgatatcctcgtcacgcaggagaga
aatcgtctgcatactctgcgtctgcataatgcgctggacggagaggtcacgccgcttacc
cgctacgaatatgacacctacggtcagttgagcgcggagatcgatacgctgtcgcatccg
cgccgttttgtttatcagcagcgccgtatggtcagccatattgatcgcaatggacagggg
tttcactaccagtacaacgaggcctggcaggtgatccacgcctggggtgatggcggggtc
tgggattaccactttgcgtaccatgcgctgctcaacgaagtggaagtcaccgactcgcag
ggcgctgtttcgcgtatcacctttgacgaacatggcctgccagtctcggaaatcgatccg
ttgggcggcaacaccgtgttccgctacgacgattttggccgcacggtggaagtgacagag
ccggacggcaacacgcaccgctgggagtatgacgaacaggggcgcatgaccgccgaacag
atgcctgatggttgcgtgattcaggcggtttatgacgatgacgggcaattactggcgctt
accgatgagaaaggtgcggtctggcgatcggaatacagtgaggccggtaatcttacccgc
gaaatcgatcccaccggtgtcgccacgagttatgagtacgacgcgtttgggcagctttgc
gcggcgaatgtgcccggcatttcgcccacgcgctaccagtatgatcgttatggctttccg
caacggattgaacaggcgggcgcaggcgcgatacagcttcgccactcggtacggggaacg
ctgctggagcgtattgacgaaagcggtggtacaacccgttttcactgggatatgaaagac
cgtctggtggcgaccaccgatccggccggcggtgaaatacgcgttgtctacgatcgcgaa
gatgacccggtcagttacaccgatgagctggggcgaacgacgcagcttcgctataacggc
agcggcatgttgacggcctgcgaaaccccggacggcgcgacactgagcttcctttatgat
gcggaagatcggctggtgacggtggtaaatcaaaatggccaacgctggcaactgacgcgc
gatgcgctcgggcgggtgacggaagagcatgattattgggggcaggtgacgcgttacggt
tgggataaggccagccggttgatacgtcgtgaggatccgctgggtcgcgaagtgcgctac
ggctatgacaaaaggggaaggctgacggagcggcgcagcggcgacacattacaggtgaaa
taccattacgatccctgtgggcggatggtgctgtgtgaaaacccgtggcggcggctgagc
tggcgctacgatgatgccggacgtgtactgctggaagagcaggatggttttcaactgcgc
tacggttacaacgaacgcggtgtgttgctaaaacgcgaaagcgacagtggtcaccaggtg
cgttatcaccttgatgcgcatgaacggctgagccagatacagcttaacgacgatgtgccc
attctgtttacctacgacgaggccggacgatgtgtgagcgaacagctctccaatgatgtc
ctgcgtacctttagtttcgacaggctggggcgactcagtacccagcaggtgctgcaacag
gatttaccgctgttcgccagtgggtttgcttacgatcgcgccgggaatctgacgttacgg
gaagatagcctgtggggcagcgatcgttacagttacgatccggtggggcggttgacggcg
cacacggcacccgatggcgcgctacgtcaatttgtgcaggatgccgccggtaatcagttg
cagacgcaaacgcatgaggtgaatgacagcgcgggcggttggtttcgtgaaggcattcac
cacggcgtgcgctatgtgtttgaccgcgccggggagctacgccagcgccgggatattcag
agtgaaggcgaaaaagaggattttgtctgggatgacaaccgccaattgatcgccgtgcgt
aaaggcgacagcctggtgcgctatggctatgacggcctgggtcgacgggtattcaagcag
acggcgagcgaaacacgctggttctactggcaggatgatgtactggcgggcgagacggtc
actaagttacaggagcctctggccgcgctcagcattttcgataccggcggcaggttaaaa
cggcagaaagcgcaggccaaactgttcagtgagatgcgggaatatgtctactacccggac
agcttctggccgctggcgttactgacgcaagaagggggagaaaagcagagctggcattat
cactgcgatcccaacggtgcgccggtcagattgacctcgccacaaggggagattgtttgg
tcggagaaaagcggcatttggggcgagaaaggcgaggtttacgccagccgcattgacaac
ccactgcgttttcaggggcagtattacgacgtagaaaccgggctgcactacaaccgctac
cgctattacgacccgaacattgcggcctatatcagccaggatcccgtgggcatggtggcg
ggggttagcgtgtatcagtacgcgccaaatccgctggcatggagcgatccgctcggcttg
cagcgatgtctgggtctaccgtctacgcgcccgccaggtggctcgaggaagaaatacaac
cgtgcgaaagggcaagggttatatattctgcacgagaatggcaaaatccgttacgttggg
cgcggcgatgcgccaacccgtttaaacgcccatgccaaaacgccgggtaaatcgcatctg
gaacagctgatcatttttgacaacaacttaaccaaagctgaagctaaatatctggaagaa
aaactgataggtatgcatggtggcgctaaatcgatgaatcctttaacgaatttattgaac
gatatccggtcttaccgccccggaaataaaaacgcacccacgtataaaatcgctggcgat
agctcagcatggggtaaagaaatcttacaagacgcgctgtctatcataaggggtagcata
tga
DBGET
integrated database retrieval system
