Komagataeibacter saccharivorans: CD178_00366
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Entry
CD178_00366 CDS
T05634
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ksc
Komagataeibacter saccharivorans
Pathway
ksc03420
Nucleotide excision repair
ksc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ksc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CD178_00366 (uvrD)
03430 Mismatch repair
CD178_00366 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ksc03400
]
CD178_00366 (uvrD)
Enzymes [BR:
ksc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CD178_00366 (uvrD)
DNA repair and recombination proteins [BR:
ksc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CD178_00366 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
CD178_00366 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
PcrA_UvrD_tudor
AAA_11
DUF3553
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AXY21185
UniProt:
A0A347W8J2
LinkDB
All DBs
Position
389214..391427
Genome browser
AA seq
737 aa
AA seq
DB search
MDSLIPTGREPDYLSRLNPEQRDAIETTDGPLLVLAGAGTGKTRVLTTRFAHILLSGRAR
PNQILAVTFTNKAAREMRERVSALMGEPAEGLWLGTFHALCARMLRRHAEYVGLTSSFTI
LDTDDQLRLLKQVLEPYRIDTKRWPPQAIMGVIQRWKDRGLVPDAITAAEDTDFANGRCA
EIYTDYQSRLRQINACDFGDLMLHMTEILRRQPDVLAQYHRFFRYILVDEYQDTNTIQYL
WLRLLAHRGDQPSNICCVGDDDQSIYSWRGAEVENILRFERDFPGARVVRLERNYRSTRQ
ILAAASGLIAHNEERLGKTLHPGREDAEGEKVRVISVQDSDDEARMVGTEIERLRADGHP
MAEIAILVRAGFQTRAFEERLITLGLPYRVVGGLRFYERAEIRDAIAYMRVINQPSDDLA
FERIINVPRRGVGTTGLQKMHMHARAREIPLTAAVLDLLAQGEIKGRAKEQLTALMQTLA
ATREMLGREGHVVAIDHLLEESGYVDMWKADKSPDAPGRLENLKELVRSLADYETLSGFL
EHVALVMDTEDRSGQDSMSIMTLHGAKGLEFDTVFLPGWEEGVFPSQRTLDEGGLKGLEE
ERRLAYVGITRARRRAIISHAANRRIYGNWQSAIPSRFVEELPAEHIESTGDTANSRRSF
LGRPAVFGSSPFPLVASRRVHDITPKPAATSGMKVGVRVFHQKFGYGTITSVEGNRLEVA
FEKAGPKRVIDTFVEQV
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atggacagccttatcccaaccggccgcgagccggactacctcagccgtctcaatcccgaa
cagcgggacgcgatcgagactacggatggcccgctactggtccttgccggcgcaggcacg
ggcaagacgcgggtgctgaccacgcggttcgcgcatatcctgctgtcgggccgcgcgcga
ccgaaccagatccttgccgtgaccttcaccaacaaggccgcgcgcgagatgcgcgaacgt
gtcagcgccctgatgggcgaaccggcggaagggctgtggctgggcacgttccatgcgctg
tgcgcgcgcatgctgcgccgccacgcggaatatgtgggcctgaccagcagcttcaccatt
ctggatacggatgaccagctacggctgctcaagcaggtgctcgaaccctaccgcatcgac
acaaaacgctggccgccacaggcgataatgggcgtgatccagcggtggaaggaccgcggt
cttgtgcccgacgccattacggcggcggaggatacggatttcgccaacgggcgctgtgcc
gagatctataccgattaccagtcccggctacgccagattaatgcctgcgattttggcgat
ctgatgctgcacatgacggaaatcctgcgcagacagcccgatgtgctggcgcagtatcac
cgtttcttccgctacatcctggtggacgaatatcaggacaccaacaccatccagtacctg
tggctgcgcctgctggcccaccggggggaccagccatcgaacatctgctgcgtgggtgat
gatgaccagtccatctattcatggcgcggggcggaggtggaaaacatcctgcgtttcgaa
cgcgactttcccggcgcacgggttgtgcggctggagcggaattaccgttccacccggcag
atactggctgcggcatcgggcctgatcgcccataacgaggaacggctgggcaagacgctg
catccggggcgagaggatgcggaaggcgagaaggtccgcgtcatttccgtgcaggactcg
gacgacgaggcccgcatggtcggcaccgagatcgaacgcctgcgcgccgatggccacccg
atggcggaaatcgccatccttgtccgcgccggtttccagacccgcgcgttcgaggaacgg
ctgataaccctcggcctgccctatcgcgtggtcggcggcctgcgtttttatgaacgcgcc
gaaatccgcgatgccatcgcctatatgcgcgtcatcaaccagccatcggatgatctggcg
tttgaacgcatcatcaacgtgccccgccgcggcgtgggcacgacggggctgcagaaaatg
cacatgcatgcccgcgcacgcgaaatcccgctgaccgcagccgtgctggaccttctggcg
cagggagagatcaagggccgggcgaaagagcagttgaccgccctcatgcagacccttgcc
gccacgcgcgaaatgctggggcgcgaagggcatgtcgtcgccatcgaccacctgctggag
gaaagcgggtatgtggacatgtggaaggcggacaaatcccccgacgcgccgggccggctg
gaaaacctgaaggaactggtccgttcgctggcggattatgaaaccctcagcggatttctc
gaacacgtcgcccttgtcatggatacggaagaccggtccggtcaggacagcatgagcatc
atgaccctgcacggcgcgaagggactggaattcgacaccgtcttcctgccgggatgggag
gaaggggtctttccttcccagcgcacgctggatgaaggcggcctcaagggactggaggag
gaacgccgtcttgcctatgtcggcatcacgcgcgcacgccgcagggccatcataagccac
gccgccaaccgccgcatctacggcaactggcagtccgccattcccagccgctttgtggag
gaactgcccgccgaacacatcgaaagcaccggcgatacggccaacagccgccgcagcttc
cttggccgccccgccgtgtttggcagttcgcccttcccgctggtagcgtcacggcgcgtg
catgacatcacgcccaaacccgccgcaacatcgggcatgaaggtgggggtgcgtgtgttt
caccagaaattcggctacggcaccattacctcggtcgagggaaaccgcctggaagtcgcc
tttgaaaaagcaggccccaagcgggtgatcgatacatttgttgagcaggtataa
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