Komagataeibacter saccharivorans: CD178_00465
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Entry
CD178_00465 CDS
T05634
Symbol
rnd_1
Name
(GenBank) Ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
ksc
Komagataeibacter saccharivorans
Brite
KEGG Orthology (KO) [BR:
ksc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ksc03016
]
CD178_00465 (rnd_1)
Enzymes [BR:
ksc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
CD178_00465 (rnd_1)
Transfer RNA biogenesis [BR:
ksc03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
CD178_00465 (rnd_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
CPCFC
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
AXY21283
UniProt:
A0A347W8U0
LinkDB
All DBs
Position
511224..511871
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AA seq
215 aa
AA seq
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MAVSPAPESIHFHRGDLPADVTFPAAVAVDTETMGLNPHRDRLCLVQLSGGDGHAHLVQM
PAGVTAADCPNLVRVLTDPDRPKIMHFARFDVAILQHTLDITVAPCICTKIASKLVRTYT
DRHGLANLCRDMLGVDLSKQQQSSDWGAPQLTPEQLAYAASDVLYLHALWEKLEALLLRE
GRRELAQACYDFMPTRARLDILGYGEPDIFAHRAA
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atggctgtaagcccagcacccgagagcatccatttccatcgcggcgacctgccggcggac
gttacgtttcccgccgccgttgccgtcgatacggaaacgatggggctgaacccgcatcgt
gaccggctctgcctcgtgcagctttcaggtggtgacgggcatgcccatctggtgcagatg
cccgctggcgtcacggcggcggactgccccaacctcgtacgcgtgctgaccgacccggac
cggcccaagatcatgcatttcgcccgctttgacgtggcgatcctccagcacacgctcgac
atcacggtagcgccgtgcatctgcaccaagatcgcatccaagctggtgcgcacctatacc
gaccgccacgggctggccaatctgtgccgggacatgctcggggtggatctgagcaagcag
cagcagtcctcggactggggtgcgccgcagcttacgcccgaacagcttgcctatgccgcc
tccgacgtgctgtacctgcatgcattgtgggaaaaactcgaagccctgctgctccgcgag
gggcggcgcgaactggcgcaggcatgctacgatttcatgcccacccgcgcccggctggat
attctgggctatggggaaccggatattttcgcacaccgggccgcctga
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