Komagataeibacter saccharivorans: CD178_01387
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Entry
CD178_01387 CDS
T05634
Name
(GenBank) PD-(D/E)XK nuclease superfamily protein
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
ksc
Komagataeibacter saccharivorans
Brite
KEGG Orthology (KO) [BR:
ksc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ksc03400
]
CD178_01387
Enzymes [BR:
ksc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CD178_01387
DNA repair and recombination proteins [BR:
ksc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
CD178_01387
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
AXY22165
UniProt:
A0A347WBC2
LinkDB
All DBs
Position
1456928..1459984
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AA seq
1018 aa
AA seq
DB search
MSARAAAPVRGRVAVVPPHVPFVDQIAARWLEQAGHDPQACGNGLILLPSRRAGRALTEA
FVRQVDGRPILLPRIAPIGALDEASLVLSGQNALDLPPAVDPMRRLATLTLLVMQAGKAF
GDVQGVDQAWPLARALAELMDEAEWAECDLCERLPHAAEGDFAQHWHQTLQFLSIVTSVW
PAWLAEQGVMNPVARQTALLHAQAARWRDSPPPAGYPVWAAGFSDAVPSTIVMLRAVLDQ
PDGMLILPGVDMECDDAIWRHLPPDHPQAGTAHMLAQLGVERAGMEIWSSLPHDCVASSP
VSRASLLSRALLPAHALERWRERDVPVEADGLSILRSADQQEEAAAIAMVLRQVLERPGR
RAALVTPDRALAGRVATELVRWGVVADDSAGESMLTVPQTAFLRLIVQAVDGGLSPVALL
SAIKHPLAACGLSPGTCRASARQLERLVLRGPAPPPGIAGLRSALQRATEDPHGALADAP
DAPEEISAFINRLETVFGPLLALPRDTMVPVSVLLAALVETAQALAATDTVDGAERLWAG
EEGNALGQHMSALLAWCDVLPDSRLGALDGLLASSLAGMTVHGRRAVRGRDGMAAHPRVF
IWGLLEARLQTADTIVLGGLVETVWPPATDPGPWMSRPMRTRVGLPSPEWGIGQAARDFV
SCACAAGQVVLSVAARRQGAPTVPARWLVRLDAYLAGHGRSLPVHPALRWLDSLDRPEGG
VATPVSPPRPCPPVGLRPRSLSVTEIETWMRDPYAIYARRILRLRRLADLEELADAADYG
QIVHAALERWFRAHPSDWPAGGAERMQAVFAEVLREAGLRPALAAWWAPRLDRIAAWCAR
TEEARRATGTPRTVLTELSGRMRLEDLPGGPFTLRGRADRIDLHDGDGGLSLFDYKTGTL
PLRRSVVEGWQSQLVLEAAMIECGGFPPPVAGSVSELVYWRLTGGHVPAQVLDVARGEEL
AELIASCRAGLRALVSAYDNPDQPYLSHPFPGEEPRFADYAHLARVAEWSAAREENGG
NT seq
3057 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcacgcgccgcagcccccgtgcggggccgggtggcggtcgtgccgccgcatgtg
ccgtttgtcgatcagattgccgcgcgctggctggagcaggccggtcatgatccgcaggca
tgtggcaatggcctgatcctgctgcccagccgccgcgcgggccgtgccctgaccgaagcc
ttcgtgcggcaggttgatggccgtcccatcctgctgccgcgcatcgcgccgatcggcgcg
ctggacgaggcgtcgcttgtcctgtccggccagaacgcgctggacctgccgcccgccgtt
gaccccatgcgtcgcctggctacgctgaccctgctggtgatgcaggcgggcaaggcgttt
ggtgatgtgcagggtgtggatcaggcatggccactggcccgtgcgctggccgaactgatg
gacgaggcggaatgggccgaatgtgacctgtgcgaacgcctgccccacgcggcggaggga
gatttcgcgcagcactggcaccagacgctgcagttcctgtccattgtcaccagtgtctgg
cccgcatggctggcggaacagggggtcatgaaccccgtcgcccgccagaccgccctgctg
cacgcgcaggccgcgcggtggcgtgattctccgccgccagcgggttatcccgtctgggct
gccggtttttccgatgccgtgccgtccaccatcgtcatgttgcgtgcggtgctggaccag
cctgacggcatgctgatcctgccgggtgtggacatggaatgtgacgacgccatctggcgg
caccttccgcccgaccacccgcaggcgggaactgcccatatgctggcgcaactgggggtg
gagcgtgccggtatggaaatatggtccagtctgccgcatgactgcgtggccagcagtccg
gtttcccgcgccagtctgctgtcgcgcgccctgctgcccgcccatgcgctggaacgctgg
cgcgaacgcgacgtgccggtggaagcggacggcctgtccatcctgcgcagcgccgaccag
caggaggaagccgccgccatcgccatggtcctgcgtcaggtgcttgaacggcccggcagg
cgcgcagcccttgtcacgcccgatcgcgcactggccggacgtgtggcgacagaactggtc
cgctggggcgtggtggcggatgacagcgcgggtgaaagcatgctcaccgtgccccagacc
gccttcctgcggctgatcgtgcaggcggtggatggcggcctgtcgccggtggcgctgctg
tcggccatcaagcatccgctggcggcctgcgggctttcgccgggaacatgccgcgccagc
gcccgccagcttgaacgcctcgtgctgcgtggcccggccccgccgccggggattgccgga
ctgcgcagcgcgctccagcgcgcgacggaagacccgcatggcgcactggccgacgcgccg
gatgcgccggaagaaatcagcgccttcatcaaccggctggaaacggtgttcggcccgctt
ctggccctgccgcgcgataccatggtgccggtatccgtgctgcttgcggcactggtcgaa
accgcgcaggcccttgccgcgaccgatacggtggatggcgccgaacggctgtgggcgggg
gaggaaggcaacgcgctgggccagcatatgagtgcgctgctggcatggtgcgacgtgctg
cccgattcccggcttggcgcgctggacgggctgctggcgtcatcgctggcgggcatgacg
gtgcacgggcgtcgggcagtgcgtgggcgcgacgggatggcggcgcatccgcgtgtgttc
atatggggcctgctggaagcgcggttgcagacggcggacaccatcgtcctcggcggtctg
gtggaaaccgtctggccacctgcgaccgatcccggaccgtggatgagccgcccgatgcgc
acccgcgtcggcctgcccagcccggaatgggggattggtcaggcggcgcgggatttcgtg
tcctgcgcgtgtgcggcggggcaggtcgtgctgtcggtcgcggcccggcggcagggcgcg
ccaaccgtgcccgcacggtggctggtgcggcttgacgcctatctggcggggcatgggcgc
agcctgcccgtacatccggcgctgcgctggctggacagtctggaccggccggaagggggc
gtggcgacccccgtttccccgccacggccctgcccgcccgttggcctgcgcccccgcagc
ctgtcggtgacggaaatcgagacatggatgcgcgatccctacgccatctacgcgcgtcgc
atcctgcgcctgcgcaggcttgcggatctggaagaactggctgatgccgccgattatggc
cagatcgtgcatgcggcgctggaacgctggttccgcgcccatccatccgactggcccgca
ggcggggcggaacggatgcaggcggtttttgccgaggtgctgcgcgaggccgggctgcgt
cccgcccttgccgcgtggtgggcgccccggctggaccgtatcgccgcatggtgcgcccgg
acggaggaagcgcgtcgcgccaccggcacgccccgcacggtcctgacggaactgagcggc
cggatgcggctggaagacctgcccggtggtccgtttaccctgcgtggccgcgcagaccgg
atcgacctgcatgatggggatggtgggcttagcctgttcgattacaagaccgggaccctg
cccctgcggcgcagcgtggtggaaggctggcagtcccagcttgttctggaagcggcgatg
atcgaatgcggcggattcccgcccccggttgcgggtagcgtatcggaactggtgtactgg
cggctgacggggggccacgtcccggcgcaggtgcttgatgtcgcgcggggggaggaactg
gcggaactgatcgccagttgccgcgcggggctgcgtgcgctggtcagtgcctatgacaat
cccgaccagccttacctgtcccatccctttccgggggaagaaccgcgcttcgctgattac
gcgcatctggcgcgggttgcggaatggagcgccgcgcgtgaggagaatggcggatga
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