Komagataeibacter saccharivorans: CD178_01613
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Entry
CD178_01613 CDS
T05634
Symbol
topA
Name
(GenBank) DNA topoisomerase 1
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
ksc
Komagataeibacter saccharivorans
Brite
KEGG Orthology (KO) [BR:
ksc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ksc03032
]
CD178_01613 (topA)
03400 DNA repair and recombination proteins [BR:
ksc03400
]
CD178_01613 (topA)
Enzymes [BR:
ksc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
CD178_01613 (topA)
DNA replication proteins [BR:
ksc03032
]
Prokaryotic type
DNA Topoisomerases
CD178_01613 (topA)
DNA repair and recombination proteins [BR:
ksc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CD178_01613 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Zn_ribbon_Top1
Motif
Other DBs
NCBI-ProteinID:
AXY22386
UniProt:
A0A347WBZ3
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All DBs
Position
complement(1711077..1713776)
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AA seq
899 aa
AA seq
DB search
MTDVVVVESPAKAKTINKYLGDQFTVLASFGHVRDLPPKDGSVRPDEGFAMVWEADERGS
RQIAAIAKALRGARHLYLATDPDREGEAISWHVRAMLEEKNLLKGIEVQRVTFNEITKSA
IKTAMAHPRELDFPLIEAYLARRALDYLVGFTLSPVLWRKLPGSRSAGRVQSVALRLICE
REAEIEVFKPREYWSVIARMTTPAGLPFTARLTHLDGHKLDQFDLNDEAGAMRAKAAVEA
GDFSVARVERRKVRRNPPPPFTTSTMQQEASRKLGMGAQVAMRTAQQLYEGIDIGGETVG
LITYMRTDGVQMAGEAIAAIRGHIGHSFGDQYVPEKARIYSTKAKNAQEAHEAIRPTDVR
RTPADMARYLSPEQRKLYELVWKRSVASQMQSAELDQVAVDITDRQQHATLRATGSIIAF
DGFLRLYSEGRDDSPAKTDDDQDRMLPAMSERDAIGRGEVTAEQHFTQPPPRYSEASLVK
KMEEIGIGRPSTYASILTVLRDRNYVQLENRRFIPEDRGRLVTAFLTSFFERYVDTQFTA
GLEEQLDDISGGRANWRDVMSAFWSDFSHAVDQTKDLKISDVITALDADLSPYFFPQRED
GQDPRVCTACNTGRLGLKLGRYGAFIGCSNYPTCQYTRKLVADPKEGEDAATLKDGMRVL
GTAPGTDEEITVRRGPWGLYVQQGEPDPEDKKAKPKRATIPRGLDGDTITLEQAAGLLSL
PRIVGIHPETGESIEAGLGRFGPYVKMGAVYGSLDKDDDVLTVGLNRAVDALAKKLASIR
TIGPHPKDGEPVLVRKGRFGPYIQHGSIVATVPRGQEMDDVTMEEALTLLKEKGKPLKAK
GKKTTTRKPAARKTKASAEDTAEGKAAPKKKAAPRKTAAKPAARKTTTRKKASTEGEAG
NT seq
2700 nt
NT seq
+upstream
nt +downstream
nt
atgactgacgtcgtggtggtcgaatcgccagccaaggcgaaaacgatcaataagtatctg
ggcgatcaatttacggttcttgcctcgttcgggcatgtgcgtgacctgccgcccaaggat
ggaagcgtgcgccccgatgagggcttcgccatggtatgggaagccgatgagcgcggcagc
cgccagatcgcggccattgccaaggccctgcgtggtgcgcgccatctgtatctggccact
gaccccgaccgtgagggagaggccatttcgtggcatgtccgcgccatgctggaggagaaa
aacctcctcaagggcatcgaggtgcagcgcgtcaccttcaatgaaatcaccaaaagcgcc
atcaagacggcgatggcccatccgcgtgaacttgatttcccgctgatcgaagcctacctc
gcccgccgggcgctggactatctggtcggcttcacgctttcgcccgtgctgtggcgtaaa
ctgcccggatcgcgcagtgcaggacgtgtgcagtccgtcgccctgcgcctgatctgcgaa
cgcgaagccgagatcgaggttttcaaaccacgcgagtactggtccgtcatcgcgcgcatg
accacgcccgccggtctgccctttaccgcgcggctgacgcatctggacggccacaagctt
gaccagttcgacctgaatgacgaagccggcgccatgcgcgccaaggccgccgtcgaggct
ggcgatttcagtgtcgccagggtcgaacgccgcaaggtccgccgcaatccgcccccgccc
ttcaccacgtccaccatgcagcaggaagcgtcccgcaagctgggcatgggcgcgcaggtt
gccatgcgcaccgcgcagcaactgtatgaaggtatcgacatcggcggcgaaacggtcggc
ctgattacctatatgcgaaccgatggcgtgcagatggcaggcgaggccattgcagccata
cgtggccatatcggccacagcttcggcgatcagtacgtgccggaaaaggcgcgtatctat
tccaccaaggccaagaacgcgcaggaagcccacgaagccatccgcccgaccgacgtgcgc
cgcacgcctgccgacatggcgcgctacctctcgcccgagcagcggaagctgtatgaactg
gtctggaagcgttcggtcgccagccagatgcagtccgccgaactcgatcaggtcgcggtg
gacatcacggaccgccagcagcacgcaaccctgcgcgccacgggctccatcatcgcgttc
gacggtttcctgcgcctgtatagcgaggggcgcgacgattcccccgccaagacggacgac
gatcaggaccgcatgctgcccgccatgagcgaacgtgatgcgatcgggcgcggcgaagtg
acggccgaacagcacttcacccagccgccgccgcgttattcggaagcgtctctggtcaag
aagatggaggaaatcggcattggccgtccctccacctacgcctcgatcctgaccgtgctg
cgcgaccgtaactacgtgcaactggaaaaccggcgcttcatccccgaagaccgggggcgg
cttgtcacggccttcctcacgtcctttttcgaacgctatgtcgatacgcagttcactgcg
gggcttgaagaacagcttgatgacatttccggcggccgcgcgaactggcgcgatgtcatg
tcggcgttctggtccgatttctcccatgcggtggatcagaccaaggacctgaagatatcc
gatgtcattacggcgctcgacgcggatctctcgccctatttcttcccccagcgcgaagac
gggcaggacccgcgcgtgtgtacggcatgcaataccggccgtctggggctgaagctgggc
cgttatggcgcgttcattggctgctccaactatccgacctgccagtacacgcgcaaactg
gtcgccgaccccaaggaaggggaagacgcggcaacgctgaaggacggcatgcgcgttctg
ggcacggcccccggcacggacgaggaaattaccgtccgtcgcgggccgtgggggctgtat
gtgcagcagggcgaacccgacccggaggacaagaaggccaaacccaagcgtgccaccatc
ccgcgcggactggatggggatacgatcacgctggaacaggcggcgggcctgctgtcgctg
ccgcgcattgtcggcatccaccccgaaaccggcgaatccatcgaagccggtctgggccgc
ttcgggccgtatgtgaaaatgggcgcggtctatggttcactggacaaggatgatgatgtc
ctgacggtggggctgaaccgcgcggtcgatgcgctggccaagaaactggcttccatccgc
accattggtccccaccccaaggatggcgagccggtgctggtgcgcaaggggcgcttcggc
ccctacatccagcatggatcgatcgtggcgaccgtgccgcgcgggcaggagatggatgat
gtcaccatggaggaagccctgaccctgctgaaggaaaagggcaagccgctcaaggcgaag
ggcaagaaaaccaccacccgcaagcccgccgcgcgcaagacgaaggccagcgccgaagac
accgctgaaggcaaggccgcacccaagaagaaagctgccccccgcaagacagcggccaaa
ccggctgcgcgcaagacgacgacccgcaagaaggccagtaccgaaggcgaggctggctga
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