Komagataeibacter saccharivorans: CD178_02040
Help
Entry
CD178_02040 CDS
T05634
Symbol
rhlE_2
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
ksc
Komagataeibacter saccharivorans
Pathway
ksc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ksc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CD178_02040 (rhlE_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ksc03019
]
CD178_02040 (rhlE_2)
Enzymes [BR:
ksc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CD178_02040 (rhlE_2)
Messenger RNA biogenesis [BR:
ksc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CD178_02040 (rhlE_2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_30
AAA_22
CHASE8
YbbR
Utp25_C
Motif
Other DBs
NCBI-ProteinID:
AXY22797
UniProt:
A0A347WD54
LinkDB
All DBs
Position
2168144..2169478
Genome browser
AA seq
444 aa
AA seq
DB search
MTTFADLHLAEPLLRALDEEGYATPTPIQAGAIPYLLEGRDLLGLAQTGTGKTAAFALPI
LDRLFREKGRAHPKGARALVLAPTRELASQIGESFASYARHMRFSYAVVFGGVGQGRQIE
ALRRGVDVLVAAPGRLLDLMGQGHVDLSGLEVLVLDEADRMLDMGFVRDIRKIVAALPTD
RQTLLFSATMPKSISDLAHGLLRDPATVQVTPPSSTVDRIRQAVMFVDTGNKREALKLLV
DSPKVERAVVFTLMKHEANKVAAFLSDHGITAEAIHGNKSQGARERAMSGFRSGNVKVLV
ATDIAARGIDVDDVTHVFNYDLPNVPESYVHRIGRTARAGREGWAVSLCDAEQRAWLRDI
EKNIGKAIPVVSEHPYHSEAAENSTMRPPVLGGGGGRGRGGGRPGGGRPGGGRPAGGGGR
PPAGGRGGRPGGGQRSGGAGRRAV
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgacaacgtttgccgatcttcatcttgcagagccgctgttgcgggcactggacgaggaa
ggctacgccaccccgacccccattcaggccggcgccatcccctacctgctggaagggcgc
gacctgcttggtctggcgcagaccggcacgggcaagaccgcggctttcgcgctgcccatc
cttgaccgcctgtttcgtgaaaagggccgtgcacaccccaagggcgcccgtgcgctggtg
ctggcgcccacgcgtgaactggcttcccagatcggggaaagctttgcatcctatgcccgc
cacatgcgcttcagctacgctgtcgtgttcggtggcgtggggcaggggcgtcagatcgaa
gccctgcgccgtggcgtggacgtgctggttgcagcccccggtcgcctgctggacctgatg
ggtcaggggcatgtggacctgtccggtcttgaagtgctggtgctggatgaagccgaccgc
atgctggacatgggtttcgtccgcgacatccgcaagatcgtcgcggccctgccgaccgac
cgccagacgctgctgttctcggccacgatgcccaagagcatttccgacctggcccatggt
ctgctgcgtgacccggccaccgtgcaggtgacgccgccgtccagcacggtggaccgtatc
cgtcaggccgtgatgttcgtcgatacgggcaacaagcgcgaggcgctgaagctgctggtg
gactcgcccaaggtcgagcgcgccgtggtgttcacgctcatgaagcatgaagccaacaag
gtcgcagccttcctgagcgatcatggcatcaccgccgaagccatccatggcaacaagtcg
cagggtgcgcgtgaacgcgccatgtcgggtttccgttccggtaacgtcaaggtgctggtg
gcgaccgacattgcggcccgtggcatcgacgtggatgacgtgacccacgtgttcaactat
gacctgccgaatgtgccggaaagctacgtgcaccgcatcggtcgtacggcgcgcgccggg
cgtgaaggctgggccgtgtcactgtgcgatgcggaacagcgtgcatggctgcgggatatt
gaaaagaatatcggcaaggccatcccggttgtgtccgaacatccctaccattcggaagcg
gccgagaactcgaccatgcgtccgcccgtgctgggtggcggcggcggtcgtggccgtggg
ggcggacgtcccggtggtggacgccccggcggtggtcgtcctgctggtggcggtggtcgt
ccccccgcaggtggccgtgggggccgccccggtggcggtcagcgttcaggtggtgcaggc
cgtcgcgcggtctga
DBGET
integrated database retrieval system
