Komagataeibacter saccharivorans: CD178_02160
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Entry
CD178_02160 CDS
T05634
Symbol
ihfB
Name
(GenBank) Integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
ksc
Komagataeibacter saccharivorans
Brite
KEGG Orthology (KO) [BR:
ksc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ksc03032
]
CD178_02160 (ihfB)
03036 Chromosome and associated proteins [BR:
ksc03036
]
CD178_02160 (ihfB)
03400 DNA repair and recombination proteins [BR:
ksc03400
]
CD178_02160 (ihfB)
DNA replication proteins [BR:
ksc03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
CD178_02160 (ihfB)
Chromosome and associated proteins [BR:
ksc03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
CD178_02160 (ihfB)
DNA repair and recombination proteins [BR:
ksc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
CD178_02160 (ihfB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
HU-CCDC81_euk_2
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
AXY22912
UniProt:
A0A347WDG9
LinkDB
All DBs
Position
2272796..2273092
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AA seq
98 aa
AA seq
DB search
MTRSELIAELAAARPHLPMREVERIVQVIFAEISNALMRGDRVELRGFGAFTIKKRDART
GRNPRTGETVSVDEKVVPFFKAGKELRERVNHANGSAD
NT seq
297 nt
NT seq
+upstream
nt +downstream
nt
atgaccagatcggaattgattgccgaacttgctgctgcccggccacatcttcccatgcgg
gaagtggagcgtattgttcaggtcatctttgctgaaatcagcaatgccctgatgcgcggg
gatcgggttgaactgcgcggttttggtgccttcaccatcaagaagcgcgatgcacgcacg
ggtcgtaacccgcgcacgggggaaaccgtgtcggtggatgaaaaggtggtaccgtttttc
aaggcaggcaaggaactgcgcgagcgcgtcaatcacgccaacggaagtgctgactga
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