Komagataeibacter saccharivorans: CD178_03391
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Entry
CD178_03391 CDS
T05634
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ksc
Komagataeibacter saccharivorans
Pathway
ksc03420
Nucleotide excision repair
ksc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ksc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CD178_03391 (uvrD)
03430 Mismatch repair
CD178_03391 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ksc03400
]
CD178_03391 (uvrD)
Enzymes [BR:
ksc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CD178_03391 (uvrD)
DNA repair and recombination proteins [BR:
ksc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CD178_03391 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
CD178_03391 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
AAA_11
DUF533
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
AXY24135
UniProt:
A0A347WGZ2
LinkDB
All DBs
Position
unnamed3:21470..23485
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AA seq
671 aa
AA seq
DB search
MAGMQTFPGEAMLAGLTPPQRQAARQEGAVVVLAGAGTGKTRTLVAGVVDRIGRRNIAPS
RILAVTFTNRAAEEMRSRIADAVGAERAPGWIGTFHAHGRRQLRTDPDIALLRDGFGIAD
AEDSRRIVRRLLQAATADGALDAQDGDTFRQRVKSVTTRIALFKDDLVLPQQAAAGVEAL
VQRYPGQTPEDVMAWHLAAALYPAYQEALREANMADFGDLLLWPTVTMQRDEDYRLDWGR
RFDAILADEFQDVNRLQYQWLQLLSRDHGEIFAVGDDAQSIYGWRGANVGYIRNFINDFP
GGTMIALEQNFRSTGHILSAANAVIALDSGRLEKTLFTATGAGDPIETMEFSGGLEEAQG
IAFEIGRRLLEGVAPDDIAILYRFNFMSRLLEEQLLKAKIPYELVNDTAFWQRGVIRDAL
ALLRLASCPDDMHSDEAFRRVINQPARGVGAKTLAKIEAVAEQDYVSLFQAAEQLFGSAR
GRSADRVRTFLSTIREISASGDAPLAERIRELLDRTGYADMYRAAGEDGRAALENLEELV
GLCVEFATLADLFDHAALGSVSGQASGEGRVRLMTIHAAKGLEYGHVFLMGWEDRLFPSA
TNPDADEERRLAYVALTRGRRRVAVTWCAWRGGRFAEPSVFLSEIPPRALCRGWLRNRLS
GTASSPSGHRV
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atggccggcatgcagacctttcccggtgaggccatgctggcggggctgacgccgccgcag
cgccaggccgcgcgacaggaaggtgcggttgtcgtgctggccggggcgggaaccggcaag
acccgcacgctggtggccggcgtggtcgaccgtatcgggcgacggaatatcgcaccttcg
cgcatcctcgccgttaccttcaccaaccgggccgccgaggaaatgcgcagccgcattgca
gatgccgtgggcgcggagcgtgcccccggatggatcggcaccttccacgcgcatggccgt
cgccagctgcgcaccgaccccgacatcgcgctgctacgtgacggcttcggtatcgctgat
gccgaggacagcaggcgtatcgtgcgcaggttgcttcaggcggcaacggcggacggggcg
ctggacgcgcaggacggcgatacgttccggcaacgggtgaaatccgtcaccacgcgcatt
gcgctgttcaaggatgatctggtgctcccgcaacaggcggccgctggcgtcgaggccctg
gtgcagcgctatccgggccagacgcccgaagatgtcatggcgtggcatctggccgcggct
ctctacccggcctatcaggaagcgctgcgtgaggcgaacatggccgattttggcgatctg
cttttatggcccacggtgacgatgcagcgcgacgaggattaccggcttgactgggggcgg
cgctttgatgccatcctcgccgatgagtttcaggacgtgaaccgcctccagtaccagtgg
ctgcagctactcagccgggaccatggcgagatcttcgcggtaggcgatgacgcgcagtcg
atttacggctggcgtggggccaatgtgggctatatccgcaattttatcaatgacttcccc
ggcggcacgatgatcgcgctggaacagaacttccggtccacgggacatatcctctcggcg
gccaatgccgtgatcgcccttgattccggtcgcctggaaaagaccctgtttaccgcaacc
ggggcaggggacccgatcgagaccatggaattcagtggcggtctcgaggaggcgcagggc
atcgcatttgaaatcgggcgccgcctgctcgaaggcgtggcgcccgacgacatcgcgatc
ctctaccggttcaatttcatgtcgcgcctgctcgaagaacagcttctgaaagcgaaaatt
ccctacgaactggtcaatgacaccgcattctggcagcgcggggtcatccgggatgcgctg
gcattgctcaggctggcctcatgcccggacgacatgcacagtgatgaggcgttccggcgc
gtgatcaaccagcccgcgcgtggggttggcgcaaaaacgctggcgaagatcgaggcggtg
gcggaacaggactatgtgtcgctgtttcaggcggcagagcagctctttggcagcgcacgg
ggcaggtctgctgacagggtgcggacattcctgtccaccatccgcgaaatcagcgcgtcg
ggggatgccccgctggcagagcgtatccgtgaactgcttgaccggaccgggtatgcggac
atgtaccgagcggcgggtgaggacgggcgcgccgcgctggaaaaccttgaggaactggtc
ggtctctgtgttgagttcgcgacccttgcggatctcttcgatcatgcggcacttggatcg
gtctcggggcaggcatccggagaaggtagggtccgcctgatgacgatccacgccgcgaag
ggactggaatatggccatgtcttcctgatgggctgggaagaccggctgtttccgtccgcc
accaacccggacgctgatgaggagcgcaggctggcctacgtcgccctgacgcggggccgc
cgacgcgtcgcggtcacctggtgtgcatggcgaggtggcaggtttgccgaaccttcggta
ttcctgtcggaaataccaccccgggccctatgccgtggctggctgagaaaccgcctcagt
ggtacggcctcgtccccgtcggggcacagggtctga
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