Komagataeibacter saccharivorans: CD178_03520
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Entry
CD178_03520 CDS
T05634
Symbol
recB
Name
(GenBank) RecBCD enzyme subunit RecB
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
ksc
Komagataeibacter saccharivorans
Brite
KEGG Orthology (KO) [BR:
ksc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ksc03400
]
CD178_03520 (recB)
Enzymes [BR:
ksc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CD178_03520 (recB)
DNA repair and recombination proteins [BR:
ksc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
CD178_03520 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AXY24264
UniProt:
A0A347WHC1
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All DBs
Position
unnamed4:14301..17501
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AA seq
1066 aa
AA seq
DB search
MAPVNADQGLVIVPAGAGAGKTHRIKTQLSDWVKRGIVRPERILAVTFTEAAAGELRERI
RAGLLADGLVAEAMAVERAYVSTIHGLGLRLLTEHALAAGASPQPRHLGDAERDLLIRQA
LAHAKALDPIKAAPERFGYAPNFVKGETVEDSLRARVLSMIDLLRGLGDKGRDAGLIAPA
LTRLDAVYGPVLDDSIAATTALQTAVQVMIAAFPEGGMAGITAKTNVEKLEKNLALFKRV
DRAPDLLDWDWQVWNDLRSLFISNRSSKTPAGYDDLATAIMAAADVLPCHPGPLADAKLH
LSCLIACAQEVMAAYETRKKALGLIDFADMITGAEHLLRTDLAVRQAVLDEIDCVIIDEF
QDTNPVQFALLWQLGQHAPRTLLVGDVKQSIMGFQGADPRLSTALAAANPDATQPLDRNW
RSTPAIMQFVNAMGAGLFGQGYNPLAPTRDAVPAPAIEVLNATQGRRSQKYSQPPEHIAE
RIARILTDTETITDRHTKAARPARPSDIALLVCRHTTAARYAEELRARGVPVRIAEDGWA
KSPVIVAARAALAFAANPADIHAGLLLRTLGPDPLPLQEALSAQIEGRLVDDPVLMRLAA
LSDILARLPVGAGLDLVLDAADLRLWAERQPDAAQSRADLLRLEAEAGEFEAAHRDLKSA
SGFHGETAKVFLGWLDARGGERDFDRHPDPSANSAEAVEIVTWHASKGREWPITVVAEFD
YGIEERAGATATRFDALDRIDDMAVVLGSASLIHTPGFAAPEATRRFIEDRRADFETNAK
NLLYVALTRARDRMVLEWPGFLKDREEDAPEATNLFHILSDTCAPQIGAGSLRINGVDCP
ALITQLPEEAGFTEYAGGAAASALRFGAAAPLPVTPLTPWRLQPSQTRSAGVPPVSRRIN
IGAPGPKALNDAYRGTALHLALRTYLTRPDLAPALALATGLDDATLALVAERATALKAWL
ADQGYTDLRAEIPVLGHTPEGAEIPGTLDLLAIGPVGAMLIDHKSGGGGEGFGHYWPQLS
SYAGLLAGLYPQHPLQGVAVFWVDHGWLELADRGASAGAFAQAGVN
NT seq
3201 nt
NT seq
+upstream
nt +downstream
nt
atggcccccgtcaatgcagatcaaggtctggtcatcgttcccgcgggtgccggcgcgggc
aagacccaccgcatcaagacccagctgtccgattgggtgaaacgcggcattgtccggccc
gaacgtatccttgccgtcacctttaccgaggccgcggctggcgagttgcgcgaaaggatc
cgtgccggccttctggccgatggactggtcgctgaggcgatggcggtcgagcgcgcctat
gtctcgaccatacatggactgggcctgcggcttttgaccgaacatgctctggcggctggc
gcctctccgcagccgcgccatctgggcgatgccgagcgggatctgctgatccgtcaggca
ctggcacatgccaaggcgctggacccgatcaaggccgcgcccgagcggttcgggtacgcc
ccgaacttcgtgaagggcgagacggtcgaagacagtttgcgcgcccgggtgctatcgatg
atcgacctcttgcgcggtcttggggacaaggggcgtgacgctggcctgatcgctccggca
ctgacgcggctggatgcggtttacgggccggttctggacgactctatcgccgcgactacc
gcgttgcagacggccgtgcaggtcatgatcgcagcctttcccgagggaggcatggccggg
atcaccgccaaaaccaatgtcgagaagctggagaaaaacctcgcgcttttcaaacgtgtt
gatcgcgcgcccgatcttctggattgggattggcaggtctggaacgatctgcgcagcctg
ttcatctctaaccgctccagcaagacgcctgcgggatatgacgaccttgccacggcgatc
atggcggcggcggatgtgctgccctgccatcccggcccgctggccgatgctaagctgcac
ctgtcctgcctgatcgcctgcgcgcaagaggtgatggcggcctatgagacccgcaagaag
gcgctcggcctgatcgactttgctgatatgatcaccggggctgagcacctgctccgcacc
gacctcgccgtgcggcaagcggtgctggacgagatcgactgcgtcatcatcgacgaattc
caggataccaaccctgtgcaattcgcgcttttgtggcagttgggtcagcacgcgccgcgc
acactgctggtgggtgatgtcaaacagtcgatcatggggtttcagggcgccgatccgcgc
ctgtccacagcgctggcggcggcaaaccccgatgcgacccagcctttggaccgcaactgg
cgctcgaccccagccatcatgcaattcgtcaatgcgatgggggctggcctctttgggcag
ggctataacccgctggcgccgacccgcgatgcggtcccagctcccgcgatcgaggttctg
aacgctacgcaggggcggcgctcacaaaagtattcgcagcccccagaacacatcgccgag
cgcatcgcccgtatcctgactgatactgagaccatcaccgaccgccacacgaaggccgcc
cggccggcgcggccttcggatatcgcgctcttggtctgccgccacaccaccgccgcccgc
tatgccgaggaattgcgcgcgcgcggcgttccggtgcggatcgccgaggatggctgggcg
aaaagcccggtgattgttgccgcccgcgccgcgctggcctttgccgccaatccggcggat
atccatgccgggctgctcttgcgcacgcttggcccggacccgctgcccttgcaggaggcg
ctatccgcccagatcgaagggcggttggtggatgacccggtgctgatgcggctggccgcg
ctctcggacattctggcccgcttgccagtgggggcggggcttgatctggtgctggatgcc
gccgacctgcgtctctgggccgaacgtcagcccgatgccgcccagtcccgcgccgatctt
ctgcggctagaggctgaggcgggtgagttcgaagccgcgcatcgcgatctcaaatccgcc
tcggggttccacggcgagactgccaaggtctttctcggctggctcgacgcccgtgggggc
gagcgcgatttcgaccgtcatcccgatccttccgccaacagcgccgaggcggtggagatc
gtcacctggcacgcctccaaagggcgggaatggccgatcactgtcgtcgccgagttcgac
tacggcatcgaggaacgtgcgggggccactgcgacccgtttcgatgccctggaccgcatc
gacgatatggcggtggtgctggggtccgcgagcctgatccacacgcccggctttgccgcg
cccgaggcgacccgccgtttcatcgaagaccgccgcgccgattttgaaaccaatgcgaaa
aaccttctctatgtcgccctgacccgtgcccgtgaccggatggtgctggaatggccgggt
tttctgaaggaccgcgaagaagacgcgcccgaggctacgaacctgtttcatatcctgtcc
gatacttgcgcgccgcagatcggggcgggcagcctgcgcatcaatggcgtggattgcccg
gcgctgatcacgcaactgcctgaagaggcgggatttaccgagtacgcaggcggtgcggca
gcctcagcgctgcgattcggtgccgctgcgccgttgcccgtgacaccgctgacgccctgg
cggctgcagccctcgcaaacccgtagtgcgggggtaccgcccgtgtcccgccgtatcaac
atcggagcacccgggccaaaggcactgaacgatgcctaccgcggcacagcactgcatctg
gcgctgcgcacatacctgacccggcccgatctggccccggctttggctctcgcgaccggg
cttgacgacgccactcttgcgctagtggccgagcgcgccacggcgcttaaagcctggctt
gccgatcagggctatacggacctgcgcgccgagattccggtgcttggccacacgcccgag
ggtgcagagatccccggcactctcgaccttctcgccatcggcccggtaggcgcgatgctg
atcgatcataaatccggcggcggtggtgaggggtttggccactattggccacagctttcc
agctatgccggactgttggccggactatacccgcagcatccgctgcagggcgtggcggtg
ttttgggtcgatcacggatggctggaactggcagataggggcgcgtcagcgggagctttt
gcacaggccggagttaactga
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