Kangiella sediminilitoris: KS2013_1173
Help
Entry
KS2013_1173 CDS
T04467
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
ksd
Kangiella sediminilitoris
Pathway
ksd00061
Fatty acid biosynthesis
ksd00071
Fatty acid degradation
ksd01100
Metabolic pathways
ksd01212
Fatty acid metabolism
ksd02024
Quorum sensing
ksd04146
Peroxisome
Module
ksd_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
ksd00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
KS2013_1173
00071 Fatty acid degradation
KS2013_1173
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
KS2013_1173
09145 Cellular community - prokaryotes
02024 Quorum sensing
KS2013_1173
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
ksd01004
]
KS2013_1173
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ksd04147
]
KS2013_1173
Enzymes [BR:
ksd01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
KS2013_1173
Lipid biosynthesis proteins [BR:
ksd01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
KS2013_1173
Exosome [BR:
ksd04147
]
Exosomal proteins
Exosomal proteins of breast milk
KS2013_1173
Exosomal proteins of breast cancer cells
KS2013_1173
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
AOE49893
UniProt:
A0A1B3BAR1
LinkDB
All DBs
Position
complement(1283280..1284935)
Genome browser
AA seq
551 aa
AA seq
DB search
MEKVWLKNYPKKVQHTIDFNQYANLSEILDEAAQNHGDRPAVTNLGVTLSYRELEEKAKD
FAAYLQNTLGLSKGDKIALMMPNLLQYPVALFGALKAGLAVVNVNPLYTPRELAHQLNDS
GAKSIVILANFADTLAEAIDDVELDNIIVTQVGDICSQPKRFIVNFVVKYIKKMVPSVSL
PGAISFVDAMKKGSAENFSPVEITQSDIAFLQYTGGTTGVAKGAVLSHKNMVANVLQTHA
WMGPFLEEGQETIITALPLYHIFSLCVNCLLFTKAAGHNIYITNPRDMKDFCKNLRAYPF
TTITGVNTLFNGLLNQESFRQLDFSQLKLAVGGGMAVQKSVAEEWQKLTGTPLLEGYGLT
ETSPVVSMNPLDLDAYNGTIGLPVPSTDVQIRDDDGKELGFDEPGELWVKGPQVMERYLG
RPKETDEVLQDGWLATGDMAVINEEGFLKIVDRKKDMILVSGFNVYPNEIEDIVALHPGV
LEVAAVGEPDDVKGEVVKIVVVKKDSSLTEEELIKHCREHLTGYKIPKEVEFRDELPKSN
VGKILRKELRK
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaagtttggctaaaaaattatcccaaaaaagttcagcacaccattgactttaat
cagtatgcgaacctgagtgaaattctagatgaagctgctcaaaaccatggtgataggcct
gctgttactaatcttggagtcactttaagctacagagaacttgaagagaaggccaaagat
tttgccgcttacctgcaaaacactctaggccttagtaagggtgataaaatagctcttatg
atgccaaatctcttgcagtatcccgtggctctgtttggtgcccttaaagcggggctggcc
gtagttaatgtgaaccctctttatactcccagagagctggctcatcagcttaatgatagc
ggagccaaaagtattgttattttagctaatttcgctgacactttagctgaagcaattgat
gatgttgagcttgataacattatagttactcaggttggtgatatatgctcacaaccgaaa
cgctttatcgttaattttgtagttaaatacataaagaaaatggtgccaagcgtcagtctg
ccgggagctatctcatttgtagacgcgatgaaaaaaggctccgctgaaaacttttcaccc
gttgaaataacacagagtgatattgctttccttcaatatactggaggaactactggtgtg
gcaaaaggtgccgtcctaagccataaaaatatggtggctaatgttttacagactcatgcc
tggatggggccgtttttggaagaggggcaagagaccattattacggcattacctctgtac
catattttctcattgtgtgtgaactgtctactgttcactaaagcggcaggccataacatc
tacattaccaaccctcgtgatatgaaggacttctgtaaaaaccttcgtgcgtacccgttt
accaccattacaggtgttaatactttatttaatgggctattgaatcaggaaagcttccgt
caactagacttttcacaactaaaactggctgttggtggcggtatggctgttcaaaagtca
gtcgctgaagagtggcaaaaactaacaggaactcctttactggaggggtatgggctgaca
gaaacttcaccagtggtaagcatgaaccctctggacttagatgcctataacggcaccatt
ggattgcctgtgccatctacggatgtacagattagagatgacgatggcaaagagcttggt
tttgatgagcctggagaactttgggtaaaaggcccacaagttatggagcgttacctgggc
cgtccgaaggaaacggatgaggtactccaggatggttggttagctacaggagatatggcg
gttatcaacgaggaaggttttttaaagatcgttgatcgtaaaaaagacatgattctggtg
tctggatttaatgtataccctaatgaaattgaggacatcgtagcgctacacccaggagtt
cttgaagtcgcggccgttggcgagcctgatgatgtaaagggagaagtggttaagatcgta
gttgtaaaaaaagattcctcgttaactgaagaagaattaattaaacattgtcgcgaacat
ctaactgggtacaaaatacctaaagaagttgagtttagagacgaactcccaaaatccaac
gttggtaaaattttgcgtaaggaattacgtaagtag
DBGET
integrated database retrieval system
