Kangiella sediminilitoris: KS2013_129
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Entry
KS2013_129 CDS
T04467
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
ksd
Kangiella sediminilitoris
Pathway
ksd03030
DNA replication
ksd03410
Base excision repair
ksd03420
Nucleotide excision repair
ksd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ksd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KS2013_129
03410 Base excision repair
KS2013_129
03420 Nucleotide excision repair
KS2013_129
03440 Homologous recombination
KS2013_129
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ksd03032
]
KS2013_129
03400 DNA repair and recombination proteins [BR:
ksd03400
]
KS2013_129
Enzymes [BR:
ksd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KS2013_129
DNA replication proteins [BR:
ksd03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
KS2013_129
DNA repair and recombination proteins [BR:
ksd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
KS2013_129
NER (nucleotide excision repair)
GGR (global genome repair) factors
KS2013_129
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HSP70
Motif
Other DBs
NCBI-ProteinID:
AOE48859
UniProt:
A0A1B3B7U1
LinkDB
All DBs
Position
125392..128115
Genome browser
AA seq
907 aa
AA seq
DB search
MSKQQTPFILVDGSSYLFRAYHVPQLQRMTNSEGMMTGAVFGVINMLKSLIKEYDPSHMA
VIFDAKGKTFRNDLYPEYKANRPPMPEDLRQQIKPIHEIVKAMGLPLLVIEGVEADDVIG
TLAKQACAEGRETLISTGDKDMAQLVSQHVTLINTMDKNNPITDYDRVIEKFGVKPEQII
DYLALVGDKVDNIPGVNKCGPKTAVKWLNEYGSLEGVMENADKVGGKIGENLREALPQLP
LSYELATIKLDCDLEYKPEDLTLNEPDLVELKELYGEMEFRRWLTEVLKEGGEEISEEED
QESAIDRSKYETILEQKDFDKWMEKLGKADLFAFDTETTSLNYMEAQLVGMSFALENGEA
AYLPLAHSYMGAPKQLDRDEVLKTMKPLLESDEVKKVGQNLKYDMSVLARYDIKLGGVEY
DTMLESYCLNSVASRHDMDSLALKHLNHANIKFEEIAGKGKNQLTFDQIELEKAAPYAAE
DADITMKLHQKLWDELKKEEGPTQVFQHIEMPLVPILSKVERNGVLVDGKLLLDKSQQFE
KRLKEIESEAFDLAGKEFNLGSPKQLQAILFEELELPVIKKTPKGQPSTAEEVLQELALD
YPLPKMILEHRSLSKLKSTYTDKLPQMINPETKRVHTSYHQAIAATGRLSSTEPNLQNIP
IRSAEGRSIRTAFIASEGCKIMAADYSQIELRIMAHLSQDKGLLKAFEEGLDVHAATAAE
VFDVALEEVSDNQRRDAKAINFGLIYGMSAFGLAKQIGTDRNTAQDYINTYFARYPGVEA
YMDNTREKAADKGYVETLYGRRLYLPEIHSKNGMRRKAAERTAINAPMQGSAADIIKLAM
IEVDQWLQDQPGIKMIMQVHDELVFEVEEKYLDEAKEKVPELMAGVAELSVPLIAEVGVG
DNWEEAH
NT seq
2724 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaacagcaaactccttttattctcgtggatggttcctcgtatcttttccgtgct
tatcacgtgccgcagttacagcggatgacgaattctgaagggatgatgactggcgccgtt
tttggtgtgattaatatgctgaaaagcctgattaaggagtatgaccctagtcacatggcg
gtgatttttgatgctaagggtaaaaccttccgcaatgatctgtatccggaatataaagct
aaccgtccgccaatgcctgaagacttaagacagcagattaaacccatccatgagatagtg
aaagccatgggtttgcctcttctggtcatagaaggagtagaggcggatgatgtcatcgga
accctggctaagcaggcttgtgccgaagggcgtgaaacgttgatttcaacgggagataaa
gatatggcacagctggtaagccagcatgtgaccctgattaatacaatggataaaaataac
ccaatcacagattatgatcgggttatcgaaaagtttggagtaaagccagaacaaatcatc
gactatttagcattggtcggagataaagtcgacaatatccccggggtcaataagtgtgga
cctaaaacagctgttaagtggctgaatgagtatggttcgctggaaggtgtgatggaaaat
gcggataaggttggtggaaaaattggcgaaaacttgcgcgaagcactgcctcagcttcct
ttgtcctatgagctggccaccatcaaattagattgcgatttagaatacaagcctgaagac
ttgactttaaatgagccagacttggttgaattaaaagaactctacggagaaatggagttt
cgtcgatggttgactgaagtgttaaaagaaggcggtgaagaaattagcgaagaagaagat
caggagtccgccattgatcgaagtaagtacgaaacgattttagaacagaaggacttcgac
aaatggatggagaaactagggaaagctgacttgtttgcttttgatacagaaaccactagc
ttgaattacatggaagcacagttggttggtatgtccttcgcattggaaaatggtgaggcg
gcctacctgcctttagcacacagctacatgggtgcgccaaagcagctcgatcgcgacgaa
gtgctaaaaacaatgaagccattactggaaagcgatgaggtcaaaaaggtaggacagaat
ttaaaatacgatatgagtgtgttagctcgatatgatattaagctcggtggtgttgagtat
gacacaatgctggaatcctattgcttaaattctgttgccagtcgccacgatatggattcg
ctggcgctgaagcatttgaaccatgccaatataaagtttgaagaaatagcgggtaagggg
aagaatcagttaacatttgatcaaattgagctcgaaaaagctgctccttacgcggcagag
gatgccgacatcaccatgaagctacaccagaagctgtgggatgaattaaaaaaagaagaa
ggcccgacacaggtctttcagcatatagaaatgccgctagtgccaatcctctccaaggtt
gaacgcaatggcgttttagtagatggcaagctactcttggacaagagccagcagtttgaa
aagcgactgaaggaaattgaatcagaagcgttcgacctggccgggaaagagtttaattta
ggatcgcctaaacagttacaggcgattttatttgaagagctggagctaccggtaatcaag
aaaacaccaaaggggcaaccatcgactgccgaggaagtgttgcaggagctggctcttgat
taccccttgccaaaaatgattttggagcaccgtagtttaagtaagctaaagtccacctat
acagataagttgccacagatgatcaacccggaaacaaagcgggtgcatacatcgtatcat
caggctatcgcagcaacgggtcgtttatcatcaacagagccgaacttgcagaatattcca
attcgttcagctgagggtagaagcattagaactgcgttcattgcgtccgagggttgtaaa
attatggctgcggattattcgcagattgagttacgaattatggcgcacctgtcacaggac
aaagggcttttaaaggcgtttgaagaggggttggatgtgcatgcagctaccgccgctgaa
gtctttgatgtggccttggaagaggtgtcagataatcagcgtcgagatgcgaaggcaatt
aactttggattgatttacggcatgtcagcatttggtctggccaaacagattggcacagat
agaaacacggcgcaggactatatcaacacctattttgctcgttacccgggagtggaagcc
tatatggataacactcgggaaaaagcagcggataaagggtacgtagaaacgctgtacggt
cgtcgcctgtacctaccagaaattcactcgaaaaatggcatgcgtcgtaaggctgctgaa
cggactgcgattaatgctccgatgcagggcagtgctgcagatatcattaaattggcgatg
attgaagtcgaccagtggctgcaggaccagcctggaatcaaaatgatcatgcaggtgcac
gatgaactggtgtttgaagtagaagaaaagtatttggatgaggccaaggaaaaggttcca
gagctcatggcaggcgtagcggaactatcagttccattaatcgcagaagtcggtgtggga
gataactgggaagaagcgcattaa
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