Kangiella sediminilitoris: KS2013_1466
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Entry
KS2013_1466 CDS
T04467
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
ksd
Kangiella sediminilitoris
Pathway
ksd03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ksd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
KS2013_1466
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ksd03400
]
KS2013_1466
DNA repair and recombination proteins [BR:
ksd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KS2013_1466
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
KS2013_1466
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_22
Kinesin
HEM4
Microtub_bd
UvrD-helicase
UB2H
Motif
Other DBs
NCBI-ProteinID:
AOE50178
UniProt:
A0A1B3BBK8
LinkDB
All DBs
Position
complement(1615921..1617906)
Genome browser
AA seq
661 aa
AA seq
DB search
MSDVFDIQSQFAPAGDQPKAIEELLEGLDDGLSHQTLLGVTGSGKTYTMANVIARSGRPA
IVMAPNKTLAAQLYGEMKEFFPNNAVEYFVSYYDYYQPEAYVPASDTFIEKDASINEHIE
QMRLSATRALLERRDSVIVASVSAIYGLGDPKAFHSMVMHLKVGDSIDQRYILRRLAELQ
YTRNDMELQRATYRVRGDLIDIYPAESDKNAIRIELFDDEVETIQTFDPLTGEVIKNLTR
VTVFPKSHYVTSRQTILDAIEKIKVELKERLAQLYDMNKLVEAQRLEQRVKFDIEMMQEL
GYCSGIENYSRYLSGAQPGEAPPCLLDYLPPDALMIIDESHVTVSQIGAMYKGDRSRKET
LVEFGFRLPSALDNRPLKFEEFERISPQTIFISATPGPYEEEHAGQVVEQVVRPTGLVDP
EVEIRPVGTQVDDLLSEIHKRVEVNERVLVTTLTKKMAEDLTDYLSEHGIRVRYLHSDVD
TVERMEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIGR
AARNLNGKAILYADKITGSMKRAIDETDRRRSIQQAFNKEHGITPQGIKKKITDVMDTGA
KSGKKRVADKKGQYHVRSLAESVEEIEKLEKEMLEFAKNLEFEKAAQIRDKIEKLREESI
A
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacgtctttgatatacagtctcaatttgccccagcaggtgatcaacctaaagcg
atagaagagttgcttgaaggtcttgatgatgggttgtcgcaccaaactctgctgggtgtg
accggttctggtaaaacctacactatggcaaacgttattgcccgaagtggtcgtcctgca
atcgtcatggctccaaataagacattagcagcccagctgtatggcgagatgaaggagttt
ttcccaaacaatgctgtcgagtattttgtttcctattacgactattaccagccagaggcg
tatgttccggcatcggatacttttatcgaaaaggacgcttcgataaatgagcacattgag
cagatgcgcctgtcagctaccagggctttacttgaacgacgggactctgtgattgtcgct
tcggtgtcagctatatacggactgggagatcctaaagcctttcatagtatggttatgcat
ttaaaggttggtgattctattgaccagcgttatatcttaaggcggttagcggagcttcaa
tatacacggaatgacatggaactacagcgcgcaacctatcgtgtacgtggcgacttaatt
gatatctatcctgcggagtccgataaaaacgctatcagaattgaactttttgatgatgaa
gtcgagactattcagacttttgatccgctaacaggtgaagtgattaaaaatcttacccgc
gttacggtgttccctaaaagccactatgtgacttccagacaaactatattggatgcaatc
gaaaaaattaaagttgagctgaaggaaagactagctcagttatatgatatgaataaactg
gtagaggcgcagcggcttgagcagcgtgtaaagttcgatattgaaatgatgcaggaactc
ggctattgctcgggtattgaaaactactcacggtatttgtcaggggctcaaccgggcgag
gctcctccatgtttattggattatttaccacccgatgctttgatgataattgacgagtca
cacgtaactgtttctcagattggggcgatgtataaaggtgatcgatcaagaaaggaaact
ctggtcgaatttggttttcgtttgccttctgcacttgataatcgtccattgaaattcgag
gagttcgaacgaatttcgccacaaactatattcatttctgctactccaggcccttatgaa
gaagagcatgctggccaggttgttgagcaggttgtgcgtccaacgggcttagtggatcca
gaggtagagattcgccctgtaggaacccaggttgatgaccttctgtccgagattcacaag
agagttgaagttaatgaacgagttctggtgacaactttgactaaaaagatggccgaagat
ctgactgactatctgtccgagcatggtattcgtgtacgttatttacactctgatgttgat
acggttgagcgtatggaaattatcagagacctacgtctgggtgagtttgatgttttagtt
ggtattaacttgttgcgagaaggtctggatatgcctgaggtatcattagttgcgattctg
gatgcggataaggaagggttcttgcgctccgagcgctccttaattcagactattggtcga
gcagctcgtaacttgaatggtaaagccattttatatgctgacaaaataacaggatccatg
aagcgagctattgacgaaacggatcgtcgtcgtagtattcagcaagcctttaataaagag
catggtattacaccgcagggaattaaaaagaaaataaccgatgtcatggatacaggcgcc
aagagtggtaaaaagcgtgttgctgataagaaagggcaatatcatgtccgcagtttagct
gaaagtgtggaagaaattgaaaagctagaaaaggaaatgctggagtttgctaagaacctt
gaattcgaaaaagcagcacaaataagggataaaattgaaaaacttcgcgaagaaagtatt
gcttaa
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