Kangiella sediminilitoris: KS2013_1478
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Entry
KS2013_1478 CDS
T04467
Name
(GenBank) Integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
ksd
Kangiella sediminilitoris
Brite
KEGG Orthology (KO) [BR:
ksd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ksd03032
]
KS2013_1478
03036 Chromosome and associated proteins [BR:
ksd03036
]
KS2013_1478
03400 DNA repair and recombination proteins [BR:
ksd03400
]
KS2013_1478
DNA replication proteins [BR:
ksd03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
KS2013_1478
Chromosome and associated proteins [BR:
ksd03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
KS2013_1478
DNA repair and recombination proteins [BR:
ksd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
KS2013_1478
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
AOE50190
UniProt:
A0A1B3BBM5
LinkDB
All DBs
Position
complement(1626758..1627060)
Genome browser
AA seq
100 aa
AA seq
DB search
MTKSQLIECLVDKNPQLSVRDVELVVKSLLDQMSETLSDGGRIEIRGFGSFSLHYRAPRV
GRNPKTGESVSLQGKHVPHFKPGKELRERVDAGKDQPIKP
NT seq
303 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaatcacaactgattgagtgtctagttgataaaaatcctcagctatctgttcgt
gatgtagaactggtggtaaagtctttacttgaccagatgtcagaaacgctttcagatggt
ggtcgtattgagatcagaggttttggtagcttttcattgcattaccgtgctccacgtgtg
ggacgtaacccaaaaacaggtgagtcagtgtctttgcaagggaaacatgttccgcacttc
aagccaggtaaagaactgcgtgagcgcgtggatgcggggaaggatcaaccgattaaacca
taa
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