Kangiella sediminilitoris: KS2013_1639
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Entry
KS2013_1639 CDS
T04467
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
ksd
Kangiella sediminilitoris
Pathway
ksd03030
DNA replication
ksd03430
Mismatch repair
ksd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ksd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KS2013_1639
03430 Mismatch repair
KS2013_1639
03440 Homologous recombination
KS2013_1639
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ksd03032
]
KS2013_1639
03400 DNA repair and recombination proteins [BR:
ksd03400
]
KS2013_1639
Enzymes [BR:
ksd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KS2013_1639
DNA replication proteins [BR:
ksd03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KS2013_1639
DNA repair and recombination proteins [BR:
ksd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KS2013_1639
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
HROB
Motif
Other DBs
NCBI-ProteinID:
AOE50349
UniProt:
A0A1B3BC15
LinkDB
All DBs
Position
complement(1791258..1794743)
Genome browser
AA seq
1161 aa
AA seq
DB search
MAPRFIHLKVHTEYSMVDSLIRVKSLLGECAERNIPAVAMTDQMNMCGLVKFYSNAVKSG
VKPIAGADLLVQDPEEEENYFRVTALCMDKQGYLNLKYLISRAYLKNQHRGLPLVKKEWL
AELNEGLIILSGGKAGDIGKAVLAGKMDQAAEFLGFWNHHFSNRFYLELQRTGRPYENEY
IHQVIGLAQGSSTPVVATNDVRFLTKDDFDAHEARVCINQGRVLADPRRPRDYSEQQYLR
SEEEMVELFDDIPEALENTVEIAKRCNLDLRLGEYFLPEFPIPDGMTIEEYFEHVSKEGL
EERLDHLYDREADNFAEIRKPYDERLQIELDVINSMGFPGYFLIVGDFIQWSKDNGVPVG
PGRGSGAGSLVAYAMKITDLDPLEFDLLFERFLNPERVSMPDFDVDFCMEGRDRVIDYVA
DRYGRNSVSQIITFGTMAAKAVIRDVGRVLSHPYGFVDKIAKLIPFEVGMTLEKAYEEEP
ELPRLYEEDEDFREVWDLARKLEGVTRNAGKHAGGVVIAPGDLEEFAPLYCDETGSNVVT
QFDKDDVESAGLVKFDFLGLRTLTIIDWALETTNRILEKRGEEAVDIAKIDTEDPKVFKL
LQEANTTAVFQLESRGMKDLIKRLKPNRFEDIIALVALFRPGPLQSGMVDDFIRRKHGLD
KVSYPHPDYQHEWLKEILDPTYGIILYQEQVMQIAQVLAGYSLGGADLLRRAMGKKKVEE
MERQRNIFKEGAEKNGVDGELAMKIFDLVEKFAGYGFNKSHSAAYALVAYQTAWLKTHHP
ASFMAAVMSSDMDNTDKVVTYVEDAEMQGITITPPDVNKGQYRFSVDDEGRIVYGIGAIK
GVGEGAIESIVTEREANGDYEDLFDFCSRVDLRKANRRVLESLIRAGALDNLGPNRATLM
ASLDEAIKAAEQFNKSQEVGQDDLFGSVVATTASEQHQYVRVKPWTDEQVLQGEKETLGL
YLTGHPIDRYVPEIQQMSITRLRDLQPTGRGRTTRVAGLIIAMRVMTTKRGDKMGILTID
DKSGRCDVTVYADTFEAYRETLVKDTVVVIDGEARHDDYSGGTSVSANSIVSFEQAREQY
CKKIVITVSDTIIGPDTMTELHEKLNQHKDGSCPVVVNLQYQQAKLSADYNLAPEWAVQP
TDSLVFALKHLPGCVEARVEY
NT seq
3486 nt
NT seq
+upstream
nt +downstream
nt
atggcacctcgctttattcatttaaaagttcatactgaatactcaatggtggacagcctg
atccgggttaagtcgctattgggggagtgtgccgagcgaaatattcctgccgtggcaatg
accgaccagatgaatatgtgtggtctggttaagttttattctaatgccgttaaatctgga
gttaaaccaatagcaggtgcagatttactggtgcaggacccggaagaagaagaaaactat
ttcagggtcaccgctctgtgtatggataagcagggttacctcaatttaaagtatttaatt
tctcgcgcttacttaaaaaaccagcaccgtggcctacccttagttaagaaagagtggtta
gcagagcttaatgaaggcctgattattttatctggcggtaaagccggtgatatcggtaaa
gcggtacttgccggtaaaatggatcaagccgctgagttcctgggcttctggaatcaccac
ttctctaatcgtttctatcttgagttacagcgtacgggacgtccgtatgagaatgaatat
attcatcaggttattggtttagcccaaggctccagtacacctgttgttgcgaccaatgat
gtccgcttcctaaccaaagatgattttgacgcacatgaagctcgagtttgtattaaccaa
gggcgagtgctggccgatcccagaagaccaagggattattctgaacaacagtatcttcgc
tctgaagaagaaatggtggagctgtttgatgatattccagaagctttagagaacaccgtc
gaaattgctaaacgctgtaacttggacctgcgtctgggtgaatacttcctacctgagttc
ccaatccctgatggcatgaccattgaagaatactttgagcatgtgtcgaaagaagggtta
gaagaacgactggatcacctatacgaccgagaagcagataactttgctgaaattcggaaa
ccatatgacgagcgtctacaaattgagttagacgtgattaactcgatgggattcccgggt
tacttccttatcgttggtgacttcattcaatggtctaaagataatggcgtacccgttggt
ccgggtcgtggttctggtgcgggttcattggttgcttacgccatgaaaattaccgacctg
gatcctctggaatttgatctgctattcgagcgattcctaaatccagagcgggtatcgatg
cctgactttgacgtagacttctgtatggaagggcgtgatcgggtaattgattatgtagcg
gatcgatatgggcgaaacagtgtatcgcagattattaccttcggtaccatggcggccaaa
gcggtaatccgtgatgttggccgtgtgttgagccacccctatggatttgtcgataaaatt
gcaaaactcattcctttcgaagtgggcatgacgctggagaaggcttatgaagaagagcct
gagcttccgcgcctgtacgaagaggatgaggatttccgtgaagtttgggacctagctcgc
aagctggaaggcgtgacccgtaatgcgggtaagcacgctggtggtgtggttatcgcacct
ggcgatctggaagaattcgcgcctctatattgcgatgagacaggtagcaacgttgttacc
caatttgataaagatgatgtggaaagcgccggactggtgaagtttgacttcttgggtttg
cgaacgctaactatcatcgactgggcattagaaacgaccaaccgcattttagaaaagcgg
ggtgaagaagcggtcgatattgcaaagattgataccgaagatccaaaggtattcaagctc
ctgcaggaagccaataccacggctgtattccagctggaatctcgtggtatgaaagatttg
attaagcgacttaaacccaaccgcttcgaagacattatcgcactggtggcgttgttccga
ccggggccgcttcagtcgggcatggttgatgacttcattcgccgtaagcacggcctggat
aaggtttcttatccgcaccctgattatcagcacgaatggctgaaagagattctcgacccg
acctacggcattatcctgtatcaggagcaggtgatgcagattgctcaggtgctggcgggg
tactcacttggtggcgcggacttacttcgccgtgcgatgggtaagaaaaaagtcgaagag
atggaacgccaacgaaacatctttaaagaaggtgcagagaaaaatggcgtagatggcgag
ctcgccatgaagattttcgatctggtagaaaaattcgcgggttatggttttaacaaatca
cactcggcggcttatgcattagttgcttaccagacagcatggctgaaaacgcatcaccca
gcctcgttcatggccgcggtgatgtcgtcagatatggataataccgacaaggtagtgacc
tacgtcgaagacgctgaaatgcagggcattaccattacgcctcctgacgttaataaaggc
caataccgattctcagtcgatgatgaaggtcgtattgtttatggtattggtgccattaaa
ggtgttggtgaaggtgcgattgaaagcatcgttactgaacgtgaagccaatggtgactat
gaggatttattcgatttctgtagccgagtcgatttaagaaaagccaatcgccgagtgctt
gagtccctgattcgtgccggggcgctggataacttagggccaaaccgtgcaaccctgatg
gcatcgctggatgaggctattaaagctgctgagcagtttaataagagtcaggaagtaggg
caggacgatcttttcggtagtgtagtagcaactacagcctcagagcagcatcagtacgta
cgagttaagccttggaccgacgaacaggtactacagggcgagaaagaaaccttagggcta
tacctgacggggcacccgatcgatcgctatgtacctgaaattcagcagatgagcattact
cgactgcgtgacttacaaccaacaggacgtggtcgtactacccgcgtagctgggcttatt
atcgccatgcgtgttatgaccactaagcgtggcgataagatgggcattttaaccattgac
gataaatctggacgctgtgatgtcaccgtctatgcggatacctttgaagcgtatcgtgaa
accctggttaaagataccgttgtggtgattgacggtgaagcccgtcatgatgactactcg
ggtggaaccagtgtcagcgcaaacagtatcgtctcattcgaacaggctcgtgagcagtat
tgcaagaaaatagtgataactgtatcggataccattatcggccctgacaccatgactgaa
ctgcatgaaaagctcaatcagcataaagatggcagctgcccggttgtggtgaatctacaa
taccagcaggctaaactatcggctgattataatctcgctccggaatgggcggttcaacca
acggactcgctggtttttgccttaaaacatcttccagggtgtgttgaggcaagagtggag
tattga
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