Kangiella sediminilitoris: KS2013_1709
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Entry
KS2013_1709 CDS
T04467
Name
(GenBank) UvrD/REP helicase
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
ksd
Kangiella sediminilitoris
Brite
KEGG Orthology (KO) [BR:
ksd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ksd03400
]
KS2013_1709
Enzymes [BR:
ksd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KS2013_1709
DNA repair and recombination proteins [BR:
ksd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
KS2013_1709
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
PDDEXK_1
DEAD
AAA_12
AAA_30
SIS_2
ResIII
Motif
Other DBs
NCBI-ProteinID:
AOE50419
UniProt:
A0A1B3BC84
LinkDB
All DBs
Position
complement(1856199..1859561)
Genome browser
AA seq
1120 aa
AA seq
DB search
MIRDQQARRDAINHERSFIVQAPAGSGKTELLTQRVLKLLSVVENPEEIVAITFTRKAAR
EMQNRIIESLYAALEEQPIEEHKILTWQLANQVLERDRYLGWGLLSSPQRLQIKTFDSLC
ASLANQMPVLANFGGQLSPTNNPMLLYQQAAKTVIDGVRTSEPWAEHVYRVLAHTDNKVQ
YLQDLLAQQLAKRDQWLRLQSEGANERAVLEQGFSDLLLVQLKQLDNVLTKEKKDKLLAD
IIFASDYFDESHELAGLKQLTEWPEPVVECLPQWKLIISFCLTKQGKLRASGQLPPQTVA
ETKEEKQLIKARKEQSKELFNELKEEPSLDEKMSSVANFPDLHFQEGEWEVIESLTELMQ
VAAASLKVEFKNSGEVDYTEIAMAASRALGDINQPSELALKLDYSISHILVDEFQDTSFS
QFNLVEQLTAGWQPDDGRTLFVVGDPMQSIYRFREANVGLFIQAREHGIGDISLDFLQLT
SNFRSSEKVVNWVNKSFEKVFPNYDDPVLGAVTLAQADATQDETSGDEVEYKLFFDDDKL
AHEREADYIASSIEWCLKNYPEQDIAVLVRARNHGEEVIQSLRERGIPYVAEEFEQLEQK
QPVLDLLTLLRILLHPLDKVAWIALFKSPWFGLSLSDITLLVEQFEDDLSLVTEQYANVT
GLSQEARTCLERQVPVLKHHLSSIYQQPLAIQLESFWLQLGGALALDDDQLEQLYTALDF
ISDFEQQTIISDYHTIEDALSQLFSPPTRSENCRVSIMTMHKSKGLEFDTVFLPRLDKKS
GANDKSLMVWEEFPTSDDRSQYLLAPVDQAGELESLYKLVSRFSKEKDRLESARLLYVAA
TRAKRRLYLTGCGKSNWNAKKEEWGLSKFDNSALMSLLAPIYENQIQAEFMRFQERDIQP
AEQEEEVFEQGWLKLMPEWKYQAINLPVHKMNFELAKTEVQELEFDWATDVAKTIGILIH
RQLELIANKQWQLTRDNIEQFATRAYQQLKTSGYDESRAQYARERLTEGLLNVSEDDRAR
WILQPHREARCELALTGNIDGDYKTFVIDRTFVDEGGTRWIIDYKSGSHLGDNVENFIRS
EVERYQPQLENYRELIKAVDDRPVKTALYFPMLKHFELLS
NT seq
3363 nt
NT seq
+upstream
nt +downstream
nt
atgattcgtgatcagcaagcgcgacgagacgcgattaatcatgaacgctcctttattgtc
caggcaccagccggttcaggtaaaacagagttattaactcagcgggtgttaaagctactg
agtgttgtggaaaatcctgaagaaatcgttgccataacttttacgcgtaaagctgctcga
gaaatgcaaaaccggattattgaatcactgtatgccgcattagaagagcagcccattgaa
gagcataaaattttaacctggcaattagccaatcaggtgttagagcgagatcgctattta
ggctggggactgctcagtagcccccaacgattacaaattaagacattcgactccttgtgc
gcttctttggccaatcaaatgccagtgctggcaaattttggtggccagttaagcccaaca
aacaatcctatgttgctctatcaacaagctgcaaagacggtaatagacggagtcaggacc
agtgaaccctgggctgagcatgtatatcgtgtactggctcatactgacaataaagttcaa
tatcttcaggatttgctggctcaacagttagcgaagcgcgatcagtggttgcgtttgcag
agtgaaggagcgaatgaacgagccgttttagagcagggtttttccgatttattattggtg
caattaaagcagcttgataacgtgttgactaaagaaaaaaaagataagctgctagcagat
attatttttgcctctgattattttgatgaaagccatgagcttgctggtctaaagcagtta
acggagtggccggagccggtagtcgaatgcttgccgcaatggaaattaatcatttctttc
tgcttaacaaaacaaggtaagctacgcgcaagcggacagctacctccgcaaacagtagct
gaaaccaaggaagagaaacagctgataaaagctcgcaaagaacagtcaaaagaattgttc
aatgagctaaaagaggaaccttcgctagatgaaaaaatgtcatcggttgcaaacttccct
gatctgcattttcaagaaggtgagtgggaagttattgaatccttaacagaattaatgcag
gtagcggcggcaagtttaaaagttgagtttaaaaatagtggtgaggttgattatacagaa
atagctatggcagcgagccgagctttgggcgacattaatcagcccagtgaactggcattg
aagctggactattcgatatcccacatactggtggatgagtttcaggacacttcctttagc
cagttcaatctagtcgaacagctgaccgctggctggcagccagatgatggacgcactttg
tttgttgtcggtgatcccatgcagtcgatttaccggttccgtgaagctaatgtgggttta
tttatacaggcaagagagcatggtattggtgatatatctctagacttcctgcaactaacc
agtaacttcagatcgagtgaaaaggttgtgaattgggtaaataaaagttttgaaaaggtc
ttccccaattatgacgaccccgttctgggcgcggttactttagctcaagctgatgccact
caggatgaaacatctggagatgaagtcgaatacaaactattttttgatgacgataaactg
gctcacgaacgtgaggctgattatattgccagctctatagagtggtgtctaaagaattat
cctgaacaggatattgcggtacttgtcagagcaaggaaccacggagaagaagtgatacag
tcactacgcgaacgtggaattccttacgttgctgaagagttcgagcagcttgagcaaaag
cagccggttcttgacctgcttactctattaagaatattactccatcctctggataaagtg
gcttggatcgcactctttaagtccccctggtttgggctaagcttgagtgatatcacactt
ttagtggagcagttcgaagatgacttatcactggtaaccgagcagtatgctaacgttacc
gggctctcgcaagaagcaaggacatgtctagaaagacaggttccggttttgaaacatcat
ctaagttctatttatcaacagccgctagcaattcagctggaaagtttttggttgcaattg
ggtggagcattagctctggatgacgatcaattggaacaactgtatacagctttggatttc
atttcagactttgagcaacagacgattatcagtgactaccataccatagaagatgcttta
agccagctgttctctcctccaacccgttcagaaaattgccgtgtgtctattatgaccatg
cataagtctaagggcctggagtttgataccgtttttttacctcggctggacaaaaagagt
ggagctaacgataaatcattgatggtatgggaggagttcccaacatcggatgatcgcagt
cagtatcttttggctcccgtagatcaggctggagaattagagtcactatataaattggtc
agtcggttctccaaagaaaaagatcgacttgaaagtgcgcgtttactttacgttgctgct
acacgagctaagaggcgtctttatttaactggttgtggtaagtctaattggaatgcaaag
aaagaagagtggggcttatcgaaatttgataattcagccttgatgagtttattggctcca
atttatgagaaccaaattcaagcagaatttatgcggtttcaggagcgggacattcagcca
gctgaacaggaagaagaagtattcgaacagggttggttaaaactcatgcctgaatggaaa
tatcaggcaattaatttgccagttcataaaatgaactttgaattggccaaaactgaagtt
caggaactggagtttgactgggcaactgatgttgctaaaacgattggtattttaattcat
aggcagttggagttgatagccaataaacagtggcagttaacgcgtgacaatatagagcaa
tttgctacaagagcttatcagcaattgaaaaccagcggttatgatgagagtcgtgctcaa
tatgccagggagcgtttaaccgagggcttattgaatgtttctgaagatgatcgcgcgcgg
tggatattacagccacaccgagaagcgcgttgcgagctggctttgaccggaaatattgat
ggtgactataaaacctttgtaatcgaccggacatttgttgatgaaggtggtacgcgctgg
atcattgattataagtcaggttctcatctgggtgataacgtagaaaactttataaggtct
gaagttgaacgttatcagccccagctagaaaattatagagagttgattaaggcagtcgat
gatagaccggttaaaaccgcattatattttccaatgttaaagcattttgaattactaagt
tag
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integrated database retrieval system
