Kangiella sediminilitoris: KS2013_641
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Entry
KS2013_641 CDS
T04467
Name
(GenBank) Lytic transglycosylase catalytic
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
ksd
Kangiella sediminilitoris
Brite
KEGG Orthology (KO) [BR:
ksd00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ksd01011
]
KS2013_641
Enzymes [BR:
ksd01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
KS2013_641
Peptidoglycan biosynthesis and degradation proteins [BR:
ksd01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
KS2013_641
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Gene cluster
GFIT
Motif
Pfam:
LysM
SLT
LysM3_LYK4_5
LysM1_NFP_LYK
LysM2_CERK1_LYK3_4_5
LysM_RLK
LysM3_NFP
LysM2_NFP
SLT_2
Motif
Other DBs
NCBI-ProteinID:
AOE49365
UniProt:
A0A1B3B9A9
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Position
complement(682737..684278)
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AA seq
513 aa
AA seq
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MKRIALLSLLVLSACSTLQKESTDNASQNSASGEHQPLPAPELAQGELSPEVEMVTKDMK
PQPPENLWDALSAEQSLTHLSNQRINQHKKRFLTHKHLLVERANKAAPYLHYIINELHKR
NMPVELAFTPMVESNFDPLAHSVVQAAGLWQFMPRTARGFGLKIDQWYDGRRDVVASTQA
ALDYYEYLNEMFDGDWLLTVAAYNVGQGNVKKAIRRNARQGKPTDYWSLRLPRETMRHVP
KWIALSKIFLNPQDYNVDLPFIENTPAFTEVIIDAPANLMQLAKISNINKSDFYRLNPAY
NKLFIPEEHGQATILVPTKNVQLFQKGLLGIEPGKSLGLLTYTVKSGDNLSTIANKHKTS
VSTLKSINKLKSDFLSIGQVLKMPGFANASEHELNFMATLDKNRQRRRYQTYRVRSGDNL
WSIGKRFGVSSSQIARWNNISKTSTLRIGQRLKVWPKRYANFASAKTSYQVKSGDSLYTI
ARKFKVKVSELTKWNRLSRNSIIRPGQRLTIYR
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgcattgcattattatcgctactggttttatcagcctgtagcacactacagaaa
gagtcgacagacaacgctagccagaatagcgcctctggcgaacatcaaccgcttccagcc
ccagagctggctcaaggcgaactatcaccagaagttgaaatggtgacaaaggatatgaag
cctcagcccccggagaatctctgggatgctcttagtgctgagcagagcttaacgcatctt
tccaatcaacgtattaatcagcacaaaaagcgtttcctgactcataaacaccttctggtc
gagcgtgcaaacaaagccgcaccgtatttgcattacattattaacgagctccataaaagg
aacatgccggtcgaactcgcttttaccccaatggtggaaagcaactttgacccactggct
cattcggtagttcaggcggctggcctttggcagtttatgccgagaacggccagaggattt
ggacttaagattgaccaatggtacgacggtcgacgtgatgtagtagcctcgacccaggca
gctttggattattacgagtacctgaacgaaatgttcgatggtgactggctactgaccgta
gcggcatataatgtaggccaagggaacgtaaaaaaagccatcagacgcaatgcaagacag
ggaaagccaacggactattggtctctacgtttacccagagaaaccatgcgtcatgtccca
aaatggatagcactgtctaaaatcttcctcaatccacaggattataatgtcgatctacct
tttattgagaatacaccggcatttacagaggtaattattgatgcgccagccaatttaatg
caactggcaaagatatcgaacatcaataaaagcgacttctatcgcctcaaccctgcgtac
aataaattatttataccagaggagcatggccaggcaacgattttagtgccgaccaagaac
gtgcagcttttccaaaaaggactgctgggaattgagccagggaaaagccttggattgcta
acttacacagttaagtcaggcgacaatctaagtactattgcaaataaacataagactagt
gtctcaacacttaaaagtattaataaactgaagtccgactttcttagtattgggcaagtt
ttgaagatgcccgggttcgccaatgcctcagagcatgaactgaactttatggcaacactg
gataaaaaccgtcagcgccgtcgctatcagacttacagagttcgaagtggtgacaaccta
tggagtattggcaaacgttttggagttagctcgtctcaaatcgctcgctggaataacatc
agcaaaacgagcaccctaagaattggccaaaggcttaaagtatggccaaagcgttatgca
aacttcgcatctgctaagacttcttaccaagtcaaatccggtgactcgctttacactatt
gcaagaaagttcaaagtcaaagtaagtgagcttaccaaatggaataggctgtctagaaac
agcatcataagacccggacaaagactaacaatttaccgttag
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