Kangiella sediminilitoris: KS2013_86
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Entry
KS2013_86 CDS
T04467
Name
(GenBank) Pyridoxal-dependent decarboxylase, exosortase system type 1 associated
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
ksd
Kangiella sediminilitoris
Pathway
ksd00300
Lysine biosynthesis
ksd00470
D-Amino acid metabolism
ksd01100
Metabolic pathways
ksd01110
Biosynthesis of secondary metabolites
ksd01120
Microbial metabolism in diverse environments
ksd01230
Biosynthesis of amino acids
Module
ksd_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
ksd00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
KS2013_86
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
KS2013_86
Enzymes [BR:
ksd01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
KS2013_86
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
AOE48817
UniProt:
A0A1B3B7R0
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All DBs
Position
complement(80795..81997)
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AA seq
400 aa
AA seq
DB search
MDQFSNRGDELLIAGKTVNQVVTLAGQTPCYVYDKAVIRSNVERLRHFFPNISLHYAIKA
NPYPPLVSFMAGMVDGLDVASGKELQLAIATDMPVQKMSFAGPGKSESEIAMAIVSGITL
NIESKTELHRITALAERLGMKAPVALRLNPDFELKSSGMKMGGGAQQFGIDVEQLPEVMT
LLQSPLTELQGLHVFTGSQNLRPESIISAHDNIFALVSRLVEEYQLDLQHLNIGGGFGIP
YFPGDTPLELDSISSNLKVLRQKHSGWLKDCEIILELGRYLVGNAGLYLCQVTDTKDSRG
KRFLITNGGMHHHLAASGNFGQIIRKNYPLAVATKMEHTEQEIVDVVGPLCTPLDILGAN
ITLPKAEIGDIIAVYQSGAYGYSASPRDFLSHPEPVQLLL
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atggatcagttttcgaacagaggcgatgagctcctgattgccggtaaaactgtcaatcaa
gtggtaaccttagccggtcagaccccctgttatgtctatgataaagctgtgattcgctct
aatgtggagcgtttgcgtcattttttcccaaatatcagcttacactatgctatcaaggcc
aacccatatccacctctggtcagctttatggctggaatggtggatggtcttgacgttgct
tccggtaaagaattacaactcgctatcgccaccgatatgcccgttcaaaaaatgagcttt
gctggacccggcaaatcagaaagcgaaattgccatggccatagtcagtgggattacgctt
aatatcgaatctaaaacagaattacatcgaattactgccctggctgaacggctgggtatg
aaagctcccgtagctctacgtctcaatcctgattttgagttgaaatcgtcaggtatgaaa
atgggcggtggtgctcaacagtttggaattgatgtcgagcaacttcctgaagtcatgaca
ttgttgcagagccctctcactgagctgcagggactgcacgttttcaccggctcacaaaat
cttcggccagagtctataatcagcgcccatgataatatttttgcactggtatctcggctg
gtggaagagtatcagctcgatctacaacaccttaacattggcggtggttttggcatccca
tatttcccgggtgacacaccgctggaactcgattcgatttccagcaacttaaaggtttta
agacaaaaacacagcggctggctcaaggactgtgaaattatccttgaactaggtcgttat
ctggttggtaatgcaggtctctatctatgtcaggttactgataccaaggattcacggggc
aagcgattcctgattaccaatggcggtatgcatcatcatctcgcagcttcaggaaatttc
ggccaaattattcgaaaaaattaccctcttgctgtcgctactaaaatggagcatacagag
caggagatcgtggatgtggtgggtccgctatgcactcccctggatatcttaggtgccaac
atcaccctgccaaaagctgaaattggtgatattattgccgtgtatcagtcaggtgcatat
ggctacagcgccagtccccgagattttttgagtcaccctgaacccgttcaattattactt
taa
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