Kytococcus sedentarius: Ksed_00040
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Entry
Ksed_00040 CDS
T00974
Name
(GenBank) DNA replication and repair protein RecF
KO
K03629
DNA replication and repair protein RecF
Organism
kse
Kytococcus sedentarius
Pathway
kse03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
kse00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Ksed_00040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kse03400
]
Ksed_00040
DNA repair and recombination proteins [BR:
kse03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Ksed_00040
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_15
AAA_21
AAA_29
AAA_27
SbcC_Walker_B
Motif
Other DBs
NCBI-ProteinID:
ACV05104
UniProt:
C7NID3
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All DBs
Position
4520..5692
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AA seq
390 aa
AA seq
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MRLRHLAVRDFRSYEQADLDLPAGVTVFVGRNGQGKTNLVEAAGYLATLGSHRVSSDQPL
VRVGAEHAIIRGAVDHDGRETVLELQINPGRANRAQLGRSPVPRARDVLGTLRTVLFAPE
DLALVKGDPAGRRAFLDALLVARQPRWAGVQADYAQALKQRNALLRDVRASRSAPSSSTV
AMLEAWDEHLAVGGASLLYARLRLVQDLRRFVEKAYRQVSEAASEAGLTYRWSLVGDEAD
AALSGLTGGGPVPERDDLARLFSASLGAMRQRELERGITLVGPHRDDLDLTLGPVPAKGY
ASHGESWSLALSLRLAAFELLRTDLGTDPVLVLDDVFAELDTGRRERLAELVADAEQVLV
TAAVETDVPQTLRERAHHVDVVLGSAEARS
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgagactgcgccacctggcggtccgtgacttccgctcctacgagcaggcggacctggac
ctgcctgccggggtgaccgtgttcgtggggcgcaatggtcagggcaagaccaacctggtg
gaggccgcgggctatctcgcgaccctgggctcgcaccgggtgagctccgaccagcccctg
gtgcgggtgggggcggagcacgccatcatccgcggcgcggtggaccacgacggccgcgag
acggtgctggagctgcagatcaaccccggccgcgccaaccgggcgcagctggggcgctcc
ccggtgccgcgggccagggacgtcctgggcaccctgcggacggtgctcttcgccccggag
gacctggccctggtgaagggtgatcctgcggggcgccgggccttcctggacgccctgctg
gtggcccggcagccgcggtgggccggggtgcaggcggactatgcccaggcgctcaagcag
cgcaatgccctgctgcgggacgtccgggcgtcgcgctcggcgccgtcctcctccaccgtg
gcgatgctggaggcctgggacgagcatctcgcggtggggggcgcttccctcctctacgca
cgtctacgacttgttcaagacttacggagattcgtggagaaggcctatcgacaggtcagc
gaagccgcctcggaggcaggtctgacctaccgctggtcgctcgtgggggacgaggccgac
gccgcgctctccgggttgaccgggggcggaccagtgccggaacgtgacgacctcgcgcgc
ctgttctccgcctccctgggcgcgatgcggcagcgcgagctcgagcgcggaatcaccctg
gtgggcccgcatcgtgacgacctcgacctcactctcggaccggtgccggcgaaggggtat
gcgagccacggggagtcgtggtcgctggcgctctccctgcgtctggccgccttcgagctg
ctgcgcacggacctggggaccgacccggtgctggtgctggacgacgtgttcgccgagctc
gacacggggcgccgcgagcgcctcgccgagctggtggccgatgcggagcaggtgttggtg
accgcggccgtggagaccgacgtgccgcagaccctgcgggagcgggcccaccacgtggat
gtcgtgctcgggagtgcggaggcccgatcgtga
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