Kytococcus sedentarius: Ksed_06850
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Entry
Ksed_06850 CDS
T00974
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
kse
Kytococcus sedentarius
Pathway
kse03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kse00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Ksed_06850
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kse03019
]
Ksed_06850
03400 DNA repair and recombination proteins [BR:
kse03400
]
Ksed_06850
Enzymes [BR:
kse01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Ksed_06850
Messenger RNA biogenesis [BR:
kse03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Ksed_06850
DNA repair and recombination proteins [BR:
kse03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Ksed_06850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
HEM4
Motif
Other DBs
NCBI-ProteinID:
ACV05745
UniProt:
C7NLS9
LinkDB
All DBs
Position
676559..678700
Genome browser
AA seq
713 aa
AA seq
DB search
MTTPDAVNLPDRALGALRRLVGREDVEFRGGQLEAVESLVSDRARVLVVQRTGWGKSAVY
FVATALRREQGAGPTIIVSPLLALMRDQIAAAGRAGVRAVTMNSANATEWDEVRAALDAD
EVDVLLVSPERLNNPRFRAEQLPELSRRCGLLVVDEAHCISDWGHDFRPDYRRIRTLLSE
LPQDTPVLATTATANERVVHDVVEQLSAGPSGRRHEVSTIRGGLARDSLRLGVLLGPEGR
PLTPEQRLGWMTAHLSELPGSGIVYCLTVSAAEDVAAALSAAGHRVAAYTGRTDTDERER
LETALRDNQVKALVATSALGMGFDKPDLGFVVHLGAPSSPVAYYQQVGRAGRATERADVV
LLPGSEDRDIWRYFATVSMPRQEQADAVLTALAGAGKPLSTPALETLVDVRRTRLELLLK
VLDVDGAVTKVPGGWTATGQQWTYDAERYARVAEAREREAALMEEYQAGAGCRMQFLQRT
LDDPTAAVCGRCDTCAGTWFPTGVPQEAIDGARSQLGGTGVVIEPRAQWPSGMNRLGVEA
SGRIPAEEQLRPGRALARLSDLGWGQRLRQVLAADPPAEDDLVRAVVLLLADWDWAERPV
GVVAMPSRRRPQLVGSLAERLSTIGRLPLLGTLDLVDGGPVGEPGGNSAFRLAGVWDRLA
VGPELGGRLQGLSGPVLLVDDLVDSRWSLTVAGRALRRAGAPGVLPLALAVEG
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgacgacccccgatgccgtgaacctccccgaccgtgccctgggcgccctgcgccggctg
gtggggcgtgaggacgtcgagttccgcggcgggcagctcgaggccgtcgagtccttggtc
tccgaccgcgcccgcgtgctggtcgtgcaacgcaccgggtggggcaagtcggcggtgtac
ttcgtggccacggcgctgcggcgcgagcagggcgccggccccaccatcatcgtctcgccc
ctgttggccctgatgcgcgaccagatcgccgccgcgggccgcgccggggtgcgggcggtg
accatgaactccgccaacgccaccgagtgggacgaggtgcgcgccgccctggacgccgat
gaggtggacgtcctgctcgtgagcccggaacgcctcaacaacccccggttccgcgccgag
cagctgcccgagctctcccgtcggtgcggtctgctcgtggtcgacgaggcccactgcatc
agcgactgggggcacgacttccggcccgactaccggcgcatccgcaccttgttgtccgag
ctgccccaggacaccccggtgctcgccaccacggccacggccaacgagcgcgtggtgcac
gacgtcgtggagcagctgtcggccggcccgtccggtcgtcgtcacgaggtgagcacgatc
cgcggcgggttggcccgggactccctgcggctgggcgtcctgctgggaccggaggggcgg
ccgctcactcccgagcagcgcctcggctggatgacggcgcacctgtccgagctgccgggc
tccggcatcgtgtactgcctgaccgtctccgccgccgaggacgtggcagcagccctgtcg
gcggcgggacaccgggtggccgcctacaccggccgcacggacaccgacgagcgggagcgg
ctggagaccgcgctgcgcgacaaccaggtgaaggctctggtggccacgtccgcgttgggg
atgggcttcgacaagccggacctcgggttcgtggtgcacctgggcgcacccagctccccg
gtggcctactaccagcaggtggggcgcgcgggccgtgccaccgagcgcgcggacgtggtg
ctgctgcccggcagcgaggaccgggacatctggcgctacttcgccacggtgtccatgccg
cgacaggagcaggccgatgcggtgctgaccgccctggcgggggcgggcaagccactgtcc
acccccgccctggagacgttggtggacgtccggcgcacccggctcgagctgctgctcaag
gtgctggacgtggacggcgcggtcacgaaggtgcccggcgggtggaccgccaccggccaa
cagtggacctacgacgccgagcgctacgcccgtgtggccgaggcccgggaacgcgaggcg
gccctgatggaggagtaccaggcgggggccgggtgccgcatgcagttcctgcagcggacc
ctcgacgaccccacggccgccgtctgcgggcggtgcgacacctgcgccgggacgtggttc
cccaccggcgtgccgcaggaggccatcgacggcgcgcggagccagctcgggggcaccggg
gtggtcatcgagccgcgggcccagtggcccagcggcatgaaccggctcggtgtcgaggcc
tccgggcgcatccccgccgaggagcagctccggccgggacgcgccctggcacgcctgagc
gacctcgggtgggggcagcgcctgcggcaggtgctggcggccgaccctcccgccgaggac
gacctcgtgcgcgcggtggtgctcctgctggcggactgggactgggccgagcggccggtc
ggagtggtggccatgccctcccgcaggcgcccgcagttggtgggctcgctggccgagcgg
ctgagcacgatcgggcgcctgcccctgctggggaccctggacctggtggacggcgggccg
gtcggggagccggggggcaacagcgccttccgcctcgccggggtctgggaccggttggcc
gtgggaccggagctgggcggccggctgcagggcctgtccggcccggtgctgctggtcgac
gacctggtggactcccggtggagcctcaccgtcgcgggccgggcgctgcgccgcgccggg
gccccgggcgtgctgccgctcgcgctcgccgtggagggatga
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