Kytococcus sedentarius: Ksed_08840
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Entry
Ksed_08840 CDS
T00974
Name
(GenBank) oligoribonuclease (3'->5' exoribonuclease)
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
kse
Kytococcus sedentarius
Pathway
kse03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
kse00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
Ksed_08840
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kse03019
]
Ksed_08840
03009 Ribosome biogenesis [BR:
kse03009
]
Ksed_08840
Messenger RNA biogenesis [BR:
kse03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Ksed_08840
Ribosome biogenesis [BR:
kse03009
]
Eukaryotic type
Pre-60S particles
RNases
Ksed_08840
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
ACV05934
UniProt:
C7NFJ9
LinkDB
All DBs
Position
complement(902398..903069)
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AA seq
223 aa
AA seq
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MSSPSQTTPPAPDERPNPSGNPRALDDRIVWIDCEMTGLEPTDVLVEIAALVTDFELNVL
GEGVQVVIRPDDLGALEGLNPVVQKMHTASGLLEEIQHGVSAAEAERQVLEYVRQWVPVA
GKAPLAGNSIATDRRFLAAEMPELDGYLHYRLIDVSSVKELSRRWFPRAWYNAPEKAGGH
RALADIRESIAELAYYRDAVFVAPPGPSTDEAREVAARHTADD
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
gtgagcagcccttcgcagaccacgccccccgcccccgacgagcgccccaaccccagcggc
aacccgcgggccctggacgaccgcatcgtctggatcgactgcgagatgacgggtctggaa
cccaccgacgtcctggtcgagatcgccgccctggtgacggacttcgagctcaatgtgctg
ggtgagggcgtgcaggtggtcatccgccccgacgacctcggggcgctcgaggggctcaac
ccggtggtgcagaagatgcacaccgccagcggcctgctggaggagatccagcacggcgtc
tccgccgccgaggccgagcggcaggtgctcgagtacgtgcgccagtgggtcccggtcgcg
ggcaaggcccccctggccgggaactccatcgccaccgaccggcgcttcctggccgcggag
atgcccgagctcgacggctacctgcactaccggctgatcgacgtctcctccgtcaaggag
ctgtcccgccggtggttcccccgcgcctggtacaacgccccggagaaggccggcggccac
cgcgccctggcggacatccgcgagtcgatcgccgagctggcctactaccgcgatgcggtg
ttcgtggccccacccggcccctccacggacgaggcccgcgaggtcgcggcccggcacacg
gccgacgactga
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