Kytococcus sedentarius: Ksed_11500
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Entry
Ksed_11500 CDS
T00974
Name
(GenBank) tRNA pseudouridine 55 synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
kse
Kytococcus sedentarius
Brite
KEGG Orthology (KO) [BR:
kse00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
kse03016
]
Ksed_11500
Enzymes [BR:
kse01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Ksed_11500
Transfer RNA biogenesis [BR:
kse03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Ksed_11500
Prokaryotic type
Ksed_11500
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
DKCLD
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
ACV06190
UniProt:
C7NH20
LinkDB
All DBs
Position
1178065..1179111
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AA seq
348 aa
AA seq
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MSRPAPAPDGLLVLDKPSGPTSHDIVSRCRWLCATRKVGHAGTLDPLATGVLLVGVGRAT
RLLTHLVGADKTYRATVRLGEGTTTEDAQGKFTQTTGVPDRDALLADPQPLRDACNALSG
ELMQVPSTVSALKVGGKRAHARVRDGEEFELEARPVTVHAFELLDVQPAQGASGTEVLDL
DVRVRVSSGTYVRALARDLGGSLGTAAHLTALRRQAVGGFTLASATPVDELVEAREGGAL
PASMPVLPMGEVARRVLPVAQLDEELTGRVRNGQQVTLPEPPAWARVDAAGRVLSGPRPP
LSADGRAALLGPDGDLVAVVEPSGQRWKPVTVFPPATPPARRLPPCSD
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
gtgagccgccccgcgccggccccggacgggttgctggtcctggacaagccgtccggcccc
acctcgcacgacatcgtctcgcggtgccggtggctgtgtgccacccggaaggtggggcac
gccggcacgctcgacccgctagcgaccggcgtgctcctggtcggggtcgggcgggccacc
cggctcctgacgcacctggtcggtgcggacaagacctaccgggcgaccgtccggctgggg
gaggggaccaccaccgaggacgcccagggaaagttcacgcagaccactggggtgcccgat
cgcgacgcgctgctggccgacccgcagcccctgcgcgacgcctgcaacgccctctccggg
gagctgatgcaggtccccagcaccgtgagcgcactgaaggtgggcggcaagcgggcccac
gcccgggtgcgtgacggggaggagttcgagctcgaggcccgcccggtgacggtgcacgcc
ttcgagctgctggacgtccagccggcacagggcgcctcgggcacggaggtgctcgacctg
gacgtccgggtgcgtgtctcctcgggcacctacgtccgcgcgctggcccgcgacctcggc
gggtccctgggcactgcagcgcacctgaccgccctgcgccgccaggccgtgggcggcttc
acattggcctcggccacccccgtggacgagctggtggaggcccgcgagggcggggcgctg
ccggcatcgatgcccgtcctgccgatgggggaggtcgcccggcgggtgctgcccgtcgcg
cagctcgacgaggagctgacggggcgggtccgcaacggccagcaggtcacgctccccgag
ccgcccgcctgggcgagggtggatgccgcggggcgggtgctgtccgggccccgcccgccg
ctctcggccgacggccgcgccgccctgctcggacccgatggggacctggtggccgtggtg
gagccgtctggccagcggtggaagccggtcacggtgttcccaccggcaacccccccggcg
cgtagacttccgccgtgctcagactga
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