Kytococcus sedentarius: Ksed_11530
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Entry
Ksed_11530 CDS
T00974
Name
(GenBank) RNAse G
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
kse
Kytococcus sedentarius
Pathway
kse03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kse00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Ksed_11530
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kse03019
]
Ksed_11530
03009 Ribosome biogenesis [BR:
kse03009
]
Ksed_11530
Enzymes [BR:
kse01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
Ksed_11530
Messenger RNA biogenesis [BR:
kse03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Ksed_11530
Ribosome biogenesis [BR:
kse03009
]
Prokaryotic type
rRNA processing factors
Ksed_11530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
S1
Motif
Other DBs
NCBI-ProteinID:
ACV06193
UniProt:
C7NH23
LinkDB
All DBs
Position
1181598..1184477
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AA seq
959 aa
AA seq
DB search
MDADQTQQPGSFALLFQAPDPEAMRATRQRGSEQEVDDEQERPTRRSRRDAQDAGRPEGR
RQQGRGNARRGRSGEDQDAAVEQDRDDSEAGRDSGDSDESTGGRQRPQRRTRARGERGSS
RGQRGDEGRDGGDDDPTSSGRGGSARGEDSGRDDRDDQDQQDDRGPQGGHEDDDSEESGG
RRSRRRRGGRGRGQSDEGAEGGQGRGGRPSERSQDDDEDGSGDGSGVSGDDDSEQGRGSR
RARKRSRGGRNRSRGQSGRSEDQGGGSDAVDEVTGVQGSTRLAAKKQRRREGREAGRRRT
VLTEAEFLARRESVHRTMVVRESAEYTQVGVLEDGVLVEHYIDRQQQTTMVGNVYLGRVQ
NVLPSMEAAFVDIGKGRNGVLYAGEVNWDAAGLPKGEQKRIESALQPGQPVLVQVTKDPI
GHKGARLTGQISLPGRYLVYVPGNTTTGISRKLPDTERARLKKILKDVVPADAGVIVRTA
AEGAAEAELRADVERLTTQWERIAAAQAKGSAPTLVHGEPDLTVRVIRDVFNEDFTKLVV
SGPTAWESVTSYIDAVAPDLTPKLERWEGEQDVFEHHRIEEQIAKAMDRKVWLPSGGSLI
FDRTEAMTVVDVNTGKFVGSGGNLEETVTKNNIEAAEEIVRQLRLRDIGGIIVVDFIDMV
LESNRDLVVRRLVECLARDRTKHQVAEVTSLGLVQMTRKRVGSGLVEVYGETCEHCDGHG
LVVQDAPVAVRGGGSGGGRRSGRQSGKEGRQQGEAQAAPRSSGPSVAQIARAVHAAALKG
DEEGLPEEQAAGGTDESAPQAPAAAAEGATDDAAEGVAEQAPREQTRAEQPATAPKAAAE
TASPAQATSGDAPAVTGRIGRRSAAPVESAPQVGDEESSSYVGAPVADAPEPAPAPARRS
SRRRAASTGAAAPSVTVAPQPAPTTSVAGGAGVAEKSTITRRTPRRRVVAPQGDGASPA
NT seq
2880 nt
NT seq
+upstream
nt +downstream
nt
atggatgcggaccagacccagcagcccggcagtttcgccctgctcttccaggcaccggac
cccgaggcgatgcgggccacgcgccagcgcggctccgagcaggaggtcgacgacgagcag
gagcgtccgacgaggcggtcacgtcgtgacgcgcaggacgccgggcgcccggaggggcgc
cgccagcagggccgcgggaacgctcgtcgcggacggtccggcgaggaccaggacgctgcg
gtcgagcaggaccgggacgactccgaggcggggcgtgactcgggtgactcggacgagtcg
accggtgggcgccagcgcccccagcgccgcacccgggcccgcggtgagcgcgggagctcc
cgcggccagcgcggcgacgagggccgcgatggcggggacgacgacccgaccagttcgggg
cgtgggggttccgcacggggtgaggactccggccgcgacgaccgggatgatcaggaccag
caggacgaccgtgggccgcagggcggtcacgaggatgacgactccgaggagagcggtggg
cgccgctcgcgtcgccgccggggcggccgcggccgcgggcagtccgacgagggcgccgag
ggcggccagggtcgtgggggtcgcccgtcggagcgttcccaggacgacgacgaggacggg
tccggcgacgggtccggggtctccggggatgacgactccgagcagggccgggggtcgcgc
cgcgcgcgcaagcgctcccgcggggggcgcaaccgctcgcgcggacagagcggccgttcc
gaggaccagggcggcggatcggacgccgtcgacgaggtgacgggggtccaggggtccacc
cggctggccgccaagaagcagcgccgtcgcgagggccgcgaggctgggcgtcgccgcacg
gtgctcaccgaggccgagttcctcgcccgccgcgagagcgtgcaccggaccatggtggtg
cgggagtccgccgagtacacccaggtgggcgtgctcgaggacggcgtgctggtcgagcac
tacatcgaccgccagcagcagaccacgatggtgggcaacgtctacctcggccgcgtgcag
aacgtgctgccctccatggaggctgccttcgtcgacatcggcaagggccgcaacggcgtg
ctgtacgccggcgaggtgaactgggacgcggccgggctgcccaagggtgagcagaagcgc
atcgagagcgccctgcagcccggccagccggtgctcgtgcaggtgaccaaggaccccatc
ggccacaagggcgcccggctcaccggccagatctcgctgccaggccgctacctggtgtac
gtgccggggaacaccaccaccggcatcagccgcaagctgccggacaccgagcgggcccgc
ctcaagaagatcctcaaggacgtcgtgccggccgatgcgggtgtgatcgtccgcaccgcc
gccgagggggctgccgaggccgagctgcgggccgacgtcgagcgcctgaccacccagtgg
gagcgcatcgcggctgcccaggccaagggctcggcaccgacgctggtgcacggcgagccg
gacctgaccgtgcgcgtgatccgcgacgtgttcaacgaggacttcaccaagctggtcgtc
tccggccccacggcctgggagtcggtcaccagctacatcgatgccgtcgccccggacctg
acccccaagctcgagcgctgggagggggagcaggacgtcttcgagcaccaccgcatcgag
gagcagatcgccaaggcgatggaccgcaaggtctggctcccctcgggagggtcgctgatc
ttcgaccgcaccgaggcgatgacggtcgtggacgtcaacaccggcaagttcgtcggctcc
ggcgggaacctcgaggagaccgtcaccaagaacaacatcgaggcggccgaggagatcgtc
cgccagctccgcctgcgcgacatcggcggcatcatcgtcgtggacttcatcgacatggtg
ctcgagagcaaccgcgacctggtggtgcgtcgactggtggagtgcctggcccgggaccgc
acgaagcaccaggtggccgaggtgacctcactcggcctggtccagatgacccgcaagcgc
gtcggcagcggcctggtcgaggtgtacggcgagacctgtgagcactgcgacggccacggc
ctggtggtgcaggacgcgccggtcgcggtccgtggcggcggctccggtggaggacgccgc
tccggacgccagtccggcaaggagggccgccagcagggcgaggcgcaggccgcgccgcgc
agctccggcccgtccgtcgcccagatcgcgcgggccgtgcacgccgccgcgctgaagggt
gacgaggagggcctgccggaggagcaggcagccggcgggaccgacgagtcggctccgcag
gccccggccgccgcggcggagggggccacggacgatgctgccgagggtgtcgcggagcag
gcgcctcgggagcagacccgggcggagcagcccgcgacggcgccgaaggccgcagccgag
accgcgtcccccgcgcaggcgacgagcggggacgccccggccgtgaccggccgcatcgga
cgtcgcagcgcggcccccgtcgagtccgcaccgcaggttggcgacgaggagtcctcgtcc
tacgtgggtgccccggtcgccgatgccccggagcccgcgccggctccggcgcggcggtcc
tcccgccgccgggcggcgagcaccggggcagccgccccatcggtgaccgtcgcgccccag
ccggcacccaccaccagcgtggccgggggagccggggtcgccgagaagagcacgatcacc
cgtcgcaccccgcgtcgccgggtcgtcgccccgcagggagacggtgcctcgccggcttga
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