Kytococcus sedentarius: Ksed_13060
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Entry
Ksed_13060 CDS
T00974
Name
(GenBank) Excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
kse
Kytococcus sedentarius
Pathway
kse03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
kse00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Ksed_13060
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kse03400
]
Ksed_13060
DNA repair and recombination proteins [BR:
kse03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Ksed_13060
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Ksed_13060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_21
AAA_29
nSTAND1
RsgA_GTPase
AAA_23
AAA_16
DnaJ_CXXCXGXG
AAA_22
NACHT
ATPase
cobW
ScfRs
Viral_helicase1
zinc_ribbon_6
Motif
Other DBs
NCBI-ProteinID:
ACV06337
UniProt:
C7NHI0
LinkDB
All DBs
Position
1352855..1355761
Genome browser
AA seq
968 aa
AA seq
DB search
MSTQKAPSRDRIVVRGARENNLKNVSVDFPRNALVAFTGLSGSGKSSLAFDTIFAEGQRR
YMESLSSYARQFLGQMDKPQVEFIEGLSPAVAIDQKSTSRNPRSTVGTITEVHDYLRLLF
ARAGVLHCPVCGEVVARQTTQQIVDQLAAVPEGTRFQVLAPVVRGRKGEHVELFSELQTS
GFARARVDGETVQLSDPPKLAKTYKHTIEVVVDRLKAKQVDGEPDRRFITRLTDSVETAL
KLAEGRLVVDYVDVDAEGDESGLPPERVLSEHLACPNEHPIGIEEIEPRTFSFNAPFGAC
PTCHGIGTELEVDPDLLVPDEELSLNEGAVTLWAQGKKMADYHRRVVEALSQELAFDMDT
PWRALPQRARQAILFGHEHKVHVRYRNRFGRERNYSTGFEGAVTQVKRLHADTESDQMRE
RYQQLMRQIPCPDCQGARLRPEVLAVRIDGINIAELSRLSIAEAARFLDQMELSEQQARI
AAQVLKEIQARLGFLLDVGLDYLTLDRAAGSLSGGEAQRIRLATQIGAGLVGVLYVLDEP
SIGLHQRDNQRLIDTLTRLRDLGNTLVVVEHDEDTIRTSDWVIDIGPGAGEHGGEVVYSG
EVEGLLESDSITGDYLAGRRALETPSVRRPGNGHHVEVRGASENNLHDVDVRFPLGTFTC
ITGVSGSGKSTLVNDILYTTLANRLNGARRIPGRHRTIKGLEHLDKVVHVDQSPIGRTPR
SNPATYTGVFDKVRSLFADTEEAKVRGYGPGRFSFNVKGGRCEACSGDGTLRIEMNFLPD
VYVPCEECHGARYNRDTLEVHFKGRTIADVLAMSIEEALEFFGAIGSISRHLQTLVDVGL
GYVRLGQPATTLSGGEAQRVKLAAELQKRSSGRTVYVLDEPTTGLHFEDVRRLLDVLQSL
ADKGNTVLVIEHNLDVIRSADHIIDMGPEGGDKGGTVVATGTPEEVAAVPESHTGRYLSQ
VLSVSAAS
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
gtgagcacgcagaaggcacccagccgcgaccgcatcgtggtgcgtggagcccgcgagaac
aacctgaagaacgtctcggtggacttcccccgcaacgcgctggtggcgttcaccgggctg
tccgggtcgggcaagtcctcgctcgcgttcgacaccatcttcgccgagggccagcgtcgg
tacatggagtcgctgtcgtcctacgcccgccagttcctcggacagatggacaagccgcag
gtcgagttcatcgagggcctctcgccggcggtggcgatcgaccagaagtcgaccagccgc
aacccccgctcgacggtgggcacgatcaccgaggtgcacgactacctgcgcctgctgttc
gcccgcgccggcgtgctgcactgcccggtctgcggtgaggtcgtggcgcggcagaccacc
cagcagatcgtggaccagctggccgcggtgccggagggcacccgcttccaggtcctcgcc
ccggtggtgcgggggcgcaagggcgagcacgtggagctcttctccgagctgcagaccagc
ggcttcgcccgggcccgcgtcgacggcgagacggtgcagctctccgacccgccgaagctc
gcgaagacctacaagcacaccatcgaggtggtggtcgaccgtctcaaggccaagcaggtc
gacggtgagccggaccgccgcttcatcacccgcctgaccgattcggtggagaccgccctg
aagcttgccgagggccggctggtcgtcgactacgtcgacgtcgacgccgagggcgacgag
agcggcctgccaccggagcgcgtgctgtccgagcacctcgcgtgcccgaacgagcacccc
atcggcatcgaggagatcgagccgcgcacgttctccttcaacgcgcccttcggcgcctgc
cccacctgccacggcatcggcaccgagctcgaggtcgaccccgacctgctggtcccggac
gaggagctgagcctcaacgagggcgcggtcacgctgtgggcccagggcaagaagatggcc
gactaccaccgtcgtgtggtcgaggcgctctcgcaggagctcgcgttcgacatggacacc
ccctggcgcgcgctgccccagcgcgcccgccaggcgatcctcttcggccacgagcacaag
gtgcacgtgcgctaccgcaaccggttcggtcgcgaacgcaactactccaccggcttcgag
ggcgcggtcacccaggtcaagcgcctgcacgcggacaccgagtccgaccagatgcgggag
cgctaccagcagctgatgcggcagatcccctgcccggactgccagggcgcgcgcctgcgt
cccgaggtgctcgcggtccgcatcgacggcatcaacatcgccgagctgtctcgcctctcc
atcgccgaggccgcccgcttcctggaccagatggagctctccgagcagcaggcgcgcatc
gcggcgcaggtgctcaaggagatccaggcccggctcgggttcctgctcgacgtcgggctg
gactacctcacgctggaccgcgccgcgggctcactctccggcggggaggcccagcgcatc
cgcctcgcgacgcagatcggcgcgggcctggtgggcgtcctgtacgtgctggacgagccc
tccatcggcctgcaccagcgcgacaaccagcgcctcatcgacaccctcacgcgcctgcgt
gacctcgggaacaccctggtggtcgtcgagcacgacgaggacacgatccgcacgtccgac
tgggtcatcgacatcgggccgggcgccggggagcacgggggagaggtcgtctactccggc
gaggtcgagggcctgctggagagcgactccatcaccggtgactacctcgccggccggcgc
gcgctggagaccccgagtgtccgccgaccgggcaacggccaccacgtggaggtgcgcggc
gcctcggagaacaacctgcacgacgtggacgtgcgcttcccgctgggtacgttcacctgc
atcaccggggtgtccggctcgggcaagtccaccctggtcaacgacatcctctacacgacg
ctggccaaccggctgaacggtgcgcgccgcatccccgggcgccaccgcaccatcaagggg
ctggagcacctggacaaggtggtgcacgtcgaccagagccccatcgggcgcaccccgcgg
tcgaacccggccacctacaccggggtcttcgacaaggtgcgctcgctcttcgccgacacc
gaggaggccaaggtccgcgggtacgggcccggccgcttcagcttcaacgtcaagggcggg
cgctgcgaggcgtgctcgggtgacggcaccctgcgcatcgagatgaacttcctgcccgac
gtgtacgtgccctgcgaggagtgccacggcgcgcgctacaaccgcgacaccctcgaggtc
cacttcaagggccggaccatcgccgacgtgctggccatgtccatcgaggaggcgctggag
ttcttcggggccatcgggtccatctcccggcacctgcagaccctggtggacgtgggcctg
ggctacgtccggctggggcagcccgccaccacgctcagcggtggtgaggcgcagcgggtg
aagctggcggccgagctgcagaagcgctccagcggccggacggtctacgtcctcgacgag
ccgaccaccgggctgcacttcgaggacgtccggcgcctgctggacgtgctgcagtcgctg
gcggacaagggcaacaccgtgctggtgatcgagcacaacctcgacgtcatccgcagcgcg
gaccacatcatcgacatgggccccgagggcggtgacaagggcggcaccgtcgtggccacc
ggcaccccggaggaggtcgccgcggtgcccgagagccacaccggccgctacctctcccag
gtgctctcggtgtccgccgcgtcctga
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