Kytococcus sedentarius: Ksed_16450
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Entry
Ksed_16450 CDS
T00974
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
kse
Kytococcus sedentarius
Pathway
kse03030
DNA replication
kse03430
Mismatch repair
kse03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
kse00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Ksed_16450
03430 Mismatch repair
Ksed_16450
03440 Homologous recombination
Ksed_16450
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
kse03032
]
Ksed_16450
03400 DNA repair and recombination proteins [BR:
kse03400
]
Ksed_16450
Enzymes [BR:
kse01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Ksed_16450
DNA replication proteins [BR:
kse03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Ksed_16450
DNA repair and recombination proteins [BR:
kse03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Ksed_16450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF655
HHH_3
OB_MCM10
DNA_pol_IIIA_C
Motif
Other DBs
NCBI-ProteinID:
ACV06660
UniProt:
C7NIM2
LinkDB
All DBs
Position
complement(1694437..1697988)
Genome browser
AA seq
1183 aa
AA seq
DB search
MSAPGSAENFVHLHNHTEYSMLDGAARIDDMFTVADEMGMPAIASTDHGSVFGAYEFWSK
SRKFETKPIVGVEAYLTPGTHRTDKTRVKFGDGGRNDVSGSGAYTHMTMWAETTEGMHNL
FRASSLASIEGFYFKPRMDRELLDRYGKGIIATTGCPSGEVQTRLRLGQYDKAKEAAAEF
RDIFGKDNFFCELMDHGLDIERQVRADLLKLAKELDLPLVATNDLHYTHKEDAKAHGALL
CVQSGSTLMDPNRFKFDSDEFYLKSAAEMRHLWREVPEACDNTLLIAERCNVEFTEGEGR
YMPRFPCPDGHDETSWFISEVQTGLARRFPEGVPDYALKQAAYEQDVIINKGYPGYFLVV
ADFINWAKENGIRVGPGRGSGAGSMCAYAMGITDLDPIPHGLIFERFLNPERASMPDFDV
DFDERRRPEVIKYVTEKYGSDRVAMIVTYGTIKAKQALKDASRVMGFPFATGEKLTKAMP
PAVMGKDIPLSGIFDEKHPRYAEAIDFRELHANDPEAREVFDTAVGLEGLKRQWGVHAAG
VIMASEPLIDLIPIMRREADGQIITQFDYPSCETLGLVKMDFLGLRNLTILDDAIANIEM
NREETIDLDALSKDMTDPAAYKLLARGDTLGVFQLDGGGMRSLLRLMQPDNFEDISAALA
LYRPGPMGANAHTNFALRKNGKQPVDYIHPELTEALEPILKMTYGLIIYQEQVMEIAQKL
AGYTLGNADLLRRAMGKKKKEVLDAEYVNFEAGMLANGYSKDAVETLWGILLPFSDYAFN
KAHTAAYGVVSYWTAYLKANYRAEYMAALLTSVRDDKDKSALYLGECRRMGIKVLPPDVN
ESIANFAAVGQDIRFGLEAIRNVGGNVVRAIVATREEKGKFTSFEDFLRKCPAVVCNKRT
IDSLIKAGAFDDLGHQRQALATVHEAYVDALVGEKKEQERGQESLFASLMGDGGDDASSI
GGMPAIPDLEWDKQTLLAFEREMLGLYVSDHPLFGIEHALSRASDTSIAHLNSEDGRPDG
AEVTIAGLITQVVTKRNKRGELWAIATVEDLEGSIECLFFARTYMTVSTMLTQDVVCVVS
GRVKRGDDAVSIFASDLRLPDLDDGPRGPVMIHMAMNQTTDAVVGKLRNVLSDHPGPTEV
QIHLTQPGRRVVMRVEDSLRVEASNSLFGDLKQLLGPNCLPVA
NT seq
3552 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcgcctgggtctgctgagaacttcgtccacctgcacaaccacaccgagtactcg
atgctggacggtgcagcgcgcatcgacgacatgttcaccgtcgccgacgagatgggcatg
cccgccatcgccagcaccgaccacgggtcggtcttcggggcctacgagttctggtcgaag
tcgcggaagttcgagaccaagccgatcgtcggtgtggaggcctacctcacccccggcacc
caccgcacggacaagacgcgggtgaagttcggcgacgggggccgcaacgacgtctccggt
tcgggcgcctacacccacatgacgatgtgggccgagaccaccgagggcatgcacaacctc
ttccgggcgtcctcgctggcctccatcgagggcttctacttcaagccgcgcatggaccgc
gagctgttggaccgctacggcaaggggatcatcgccaccacggggtgcccgtccggtgag
gtgcagacccggctgcggctggggcagtacgacaaggccaaggaggccgcggccgagttc
cgggacatcttcggcaaggacaacttcttctgcgagctgatggaccacgggctcgacatc
gagcgccaggtccgggccgacctgctgaagctcgccaaggaactcgacctgccgctggtg
gccaccaacgacctgcactacacgcacaaggaggacgccaaggcccacggtgccctgctg
tgcgtgcagtccgggtcgacgctgatggaccccaaccggttcaagttcgacagcgacgag
ttctacctgaagtcggccgctgagatgcgccacctgtggcgcgaggtgcccgaggcctgc
gacaacacgctgctcatcgccgagcggtgcaacgtcgagttcaccgagggcgagggccgg
tacatgccgcgcttcccctgccccgacggccacgacgagaccagctggttcatctccgag
gtgcagaccgggctggcccgtcgcttccccgagggggtgccggactacgcgctgaagcag
gccgcctacgagcaggacgtcatcatcaacaaggggtacccggggtacttcctggtggtc
gcggacttcatcaactgggccaaggagaacggcatccgggtcgggccgggccgtggctcg
ggtgcggggtccatgtgcgcgtacgcgatggggatcaccgacctcgaccccatcccgcac
ggactgatcttcgagcgcttcctcaaccccgagcgcgcctcgatgccggacttcgacgtc
gacttcgacgaacgccgtcgccccgaggtcatcaagtacgtcaccgagaagtacggcagc
gaccgcgtggccatgatcgtcacctacggcaccatcaaggccaagcaggccctgaaggac
gcctcccgcgtgatgggcttcccgttcgccaccggggagaagctcaccaaggccatgccc
ccggcggtgatgggcaaggacatcccgctgtcggggatcttcgacgagaagcacccgcgc
tacgccgaggccatcgacttccgcgagctgcacgccaacgaccccgaggcccgcgaggtg
ttcgacaccgcggtggggctggaggggctgaagcgccagtggggggtacacgcggccggc
gtcatcatggccagcgagcccctcatcgacctcatcccgatcatgcggcgcgaggccgac
ggccagatcatcacgcagttcgactaccccagctgcgagacgctcggcctggtcaagatg
gacttcctgggcctgcgcaacctcacgatcctcgatgacgcgatcgccaacatcgagatg
aaccgcgaggagacgatcgacctcgatgccctgagcaaggacatgaccgacccggcggcc
tacaagctgctggcgcgcggtgacaccctcggtgtgttccagctcgacggcggcggcatg
cgctcgctgctgcggctcatgcagccggacaacttcgaggacatctccgccgccctcgcg
ctgtaccgccccggcccgatgggggccaacgcccacaccaacttcgcgctgcgcaagaac
ggcaagcagccggtggactacatccacccggagctcaccgaggcgctcgaaccgatcctg
aagatgacctacgggctgatcatctaccaggagcaggtcatggagatcgcgcagaagctg
gccgggtacacgctcggcaacgccgacctgctgcgtcgcgcgatgggcaagaagaagaag
gaggtgctggacgccgagtacgtgaacttcgaggccggcatgctcgccaacggctactcc
aaggacgcggtggagacgctctggggcatcctgctgcccttcagcgactacgcgttcaac
aaggcccacaccgcggcctacggcgtggtctcctactggacggcctacctcaaggccaac
taccgggccgagtacatggccgccctgctcaccagcgtgcgcgacgacaaggacaagtcc
gcgctctacctgggggagtgccgccgcatgggcatcaaggtgctcccgccggacgtcaac
gagtccatcgcgaacttcgcggccgtcgggcaggacatccgcttcgggctggaggccatc
cgcaacgtcggcggcaacgtggtgcgcgccatcgtggccacgcgcgaggagaaggggaag
ttcacctccttcgaggacttcctgcgcaagtgccctgcggtggtgtgcaacaagcgcacc
atcgactccctcatcaaggccggggcgttcgacgacctgggccaccagcggcaggccctg
gcgaccgtgcacgaggcctacgtcgacgcgctggtgggggagaagaaggagcaggagcgc
ggccaggagtcgctgttcgcctcgctgatgggggacggcggcgacgacgcctccagcatc
ggcggcatgcccgcgatcccggacctggagtgggacaagcagaccctgctggccttcgag
cgggagatgctgggtttgtacgtctcggaccacccgctgttcggcatcgagcacgccctg
agccgggcgagcgacaccagcatcgcccacctgaactccgaggacggccggcctgacggg
gcggaggtcaccatcgccgggctgatcacgcaggtggtcaccaagcgtaacaagcggggt
gaactgtgggcgatcgcgacggtggaggacctcgaggggtccatcgagtgcctgttcttc
gcgcgcacctacatgaccgtctccacgatgctgacgcaggacgtcgtctgcgtggtcagc
gggcgcgtgaagcgcggggacgatgcggtgtcgatcttcgccagcgacctgcgcctgccg
gacctcgacgacggaccccggggcccggtgatgatccacatggccatgaaccagaccacc
gacgcggtggtcggcaagctgcgcaacgtgctctcggaccaccccgggcccaccgaggtg
cagatccacctcacccagcccggtcggcgcgtggtcatgcgggtggaggacagcctccgc
gtggaggcgagcaactccctcttcggtgacctcaagcagctcctgggcccgaactgcctg
ccggtggcctga
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integrated database retrieval system
