Kytococcus sedentarius: Ksed_19190
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Entry
Ksed_19190 CDS
T00974
Name
(GenBank) DNA/RNA helicase, superfamily I
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
kse
Kytococcus sedentarius
Pathway
kse03420
Nucleotide excision repair
kse03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
kse00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Ksed_19190
03430 Mismatch repair
Ksed_19190
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kse03400
]
Ksed_19190
Enzymes [BR:
kse01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Ksed_19190
DNA repair and recombination proteins [BR:
kse03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Ksed_19190
MMR (mismatch excision repair)
Other MMR factors
Ksed_19190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
ACV06919
UniProt:
C7NJY7
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All DBs
Position
complement(1995897..1999256)
Genome browser
AA seq
1119 aa
AA seq
DB search
MHWGAADLADLLGQHRPTPEQAAVIETRDPAQLVVAGAGSGKTETMAARVVWLVANRLVR
SDQVLGLTFTRKAAAELSERLAARLDALVRAGVLAAEELQPPVVSTYNAWSGGIVAEHGL
RLGIEPGARVLSAVEAWQGVTDLVTTWPGELPPGLTSIEGAVQGVLTLAGQMGDHLVSGE
QVERELDRLDELLGTVAPNRSGRPYADVLKAQATLAVRRALVPMVQRWQELKAERQVLEF
SDQTQLSARLARGHAAVGRVERARSRAVLLDEFQDTTEAQLSVVRGVFAGDPTLSVTAVG
DPHQSIYGFRGASARTMESFVESFDATERHLSTSWRNSGRVLRVANRVAEPLRERSALDL
PALRPRPGTDEGPPVTASRFGTPADEARAGAAWLAEHWAPGELGAAVLCRKRSQFPVVTE
ALEAAGLPYEVVGLGGLLLVPEVADVRALLGVVDDPTRGDHLMRLLTGPAARLGAADLVG
LHAWRRELERRWGVRSPGDEGSAERRDHQQLAVTLLDAVLTPVEAGWTGPQGEAVSDLAR
ARLASLAEAVTQCLGAQHRGVGELALVAEQALGVDVELASRTDVPPWRARAHLEAFHEHV
ATFAEAGTREPSLSALMGWLSAAEQHEGALEPGAVEVDPSAVQVLTVHASKGLEWDAVWV
PGLVAGTFPSGTGTVRPEGPEWVARPATDSAWWAPASGMLPFALRGDAPSLPEWSLPADP
DKADFETAMKDFARANGERGLQEERRLAYVAVTRARRLLHLSSAVWGTSAAPTPTSDFLL
EVLDDCAPGTWVEMPPTDPVPENPVTATPRTALWPRPEAEDLEHHAHAAAAAEVGLALET
APGSEPGWTGLAEDSREHLLRFRQDVRLLLAERDAADQPDIEPLRHVSTSSLVALARDPG
ARRFLARPVPTPPARAARQGTDFHAWVESQWAPARLFDVPDLPQESQGEWDAHEERDAQE
ERAAPGAPQDGLALDGPRLRTRAPGEADLRRFQEHFVASEWSGRTPTWVELPLQTNVAGL
TVRGRADAIFPATRAERDAGLEWVVVDWKTSSSPREAEVGAAAVQLACYRQAFAAWRGID
PATVGGAFFHAADGVTVRPELPDGERLEQLVRLLGEPPA
NT seq
3360 nt
NT seq
+upstream
nt +downstream
nt
gtgcactggggcgcggcggacctcgccgacctgttgggccagcaccggccgacgccggag
caggccgccgtcatcgagacccgcgacccggcgcagctggtggtggccggggccgggtcg
ggcaagaccgagaccatggccgcccgtgtggtctggctggtggccaaccggctggtgcgc
tccgaccaggtgctggggctgaccttcacccgcaaggccgctgccgagctctccgagcgg
ctcgcggcgaggctggacgcgctggtgcgggcgggggtgctggcggccgaggagctgcag
ccgccggtggtctccacctacaacgcgtggagcggcggcatcgtggccgagcacgggctg
cggctgggcatcgagcccggcgcgcgggtgctctcggcggtggaggcctggcagggggtg
accgacctggttaccacctggcccggtgagctgccaccggggctgaccagcatcgagggc
gcggtgcagggggtgctgacgctcgccggccagatgggcgaccacctcgtgagcggcgag
caggtggaacgcgagctcgaccgcctggacgaactgctgggcaccgtcgcccccaaccgc
tcgggccggccgtacgccgacgtgctgaaggcgcaggccacgctggccgtccgccgggcg
ctggtgccgatggtgcagcgctggcaggagctcaaggccgaacgccaggtgctggagttc
tccgaccagacgcagctctcggcccggttggcgcgcggccacgccgcggtgggccgggtg
gagcgggcccgcagccgggcggtgctgctggacgagttccaagacaccaccgaggcgcag
ctgtcggtggtccggggcgtgttcgccggcgaccccacgctgagcgtcaccgccgtgggg
gacccccaccagtccatctacggcttccggggggcctcggcgcgcacgatggagtcgttc
gtggagtccttcgacgccaccgagcgccacctgtccaccagctggcgcaactccggccgc
gtgctgcgggtggccaaccgggtggccgagcccctccgcgagcgcagcgccctggacctg
ccggcactgcgcccgcgcccgggcaccgacgagggcccaccggtcaccgccagccggttc
gggacccctgccgacgaggcccgggccggcgcggcgtggctggcggagcactgggcgccc
ggggagctcggcgccgcggtgctgtgccgcaagcgctcgcagttcccggtggtgaccgag
gccttggaggccgcgggcctgccctacgaggtggtgggcctggggggcctgctgctggtg
cccgaggtcgcggacgtgcgggcgctgctgggcgtcgtggacgaccccacccggggggac
cacctgatgcggctgctcaccgggcccgccgcccggctgggcgctgcggacctggtgggt
ctgcacgcctggcgccgcgagctcgagcggcggtggggcgtgcgcagccccggtgacgag
ggatctgccgaacggcgcgaccaccaacagctcgcggtcacgctgctcgatgcggtgctc
accccggtggaggccgggtggaccgggccgcagggggaggccgtcagtgacctggcccgg
gcccgtctggcctcgctggccgaggctgtcacccagtgcctcggcgcccagcaccggggc
gtcggcgagctggcgctggtggccgagcaggcgctcggggtggacgtcgagctggcctcg
cgcacggacgtgccgccgtggcgggcccgcgcccacctggaggccttccacgagcacgtg
gccaccttcgccgaggccggcacccgcgaaccgagcctctcggcgctgatgggctggctg
agcgccgccgagcagcacgagggcgccctggagcccggcgccgtggaggtggacccttcc
gcggtgcaggtgctcaccgtgcacgcctccaaggggctggagtgggatgcggtgtgggtg
cccgggctggtcgccggcaccttcccctcaggcacaggcacggtgcgccccgagggtccc
gagtgggtggcgcggccggccaccgacagtgcctggtgggccccggcctcggggatgctg
cccttcgccctgcggggggacgccccctcgctgccggagtggtcgctcccggcggacccg
gacaaggcggacttcgagaccgccatgaaggacttcgcccgggccaacggcgagcgcggt
ctgcaggaggagcgccgcctggcctacgtggccgtcacccgcgcgcgccgactgctgcac
ctctcgtccgcggtgtggggcacctcggcggcacccacgcccaccagcgacttcctgctg
gaggtgctggacgactgcgcaccgggcacctgggtggagatgccgccgacggacccggtg
cccgagaaccccgtgacggccaccccccgcacggcgctgtggccccgcccggaggccgag
gacctggagcaccacgcccacgccgcggcggcggccgaggtgggcctggccctggagacc
gccccgggctccgagcccgggtggacgggcctggctgaggactcccgggagcacctgctg
cgcttccggcaggacgtgcgcctgctgctcgcggaacgcgatgccgccgaccagcctgac
atcgagccgctgcggcacgtcagcacgagctccctggtggcactggcccgggaccctggc
gcccggcgcttcctcgcccgtccggtccccaccccgccggcccgggccgcgaggcagggc
acggacttccacgcttgggtggagtcgcagtgggccccggcgcgcctgttcgacgtgccg
gacctgccgcaggaatcgcagggggagtgggacgcgcacgaggaacgggacgcgcaggag
gagcgggccgcaccgggtgcgccgcaggacgggctggcactcgacgggccccgcctgcgc
acccgcgcgccgggggaggcggacctgcgccggttccaggagcacttcgtcgccagcgag
tggtcgggccgcacgcccacctgggtcgagctgccgctgcagaccaacgtggcgggtctg
acggtgcgcggccgggcggacgcgatcttccccgccacccgggccgagcgcgacgccggg
ctggagtgggtggtggtcgactggaagacctcgtcctccccccgggaggcagaggtcggc
gcggcggccgtccagctcgcctgctaccgccaggccttcgcggcgtggcgcggcatcgac
cccgccaccgtgggtggggccttcttccacgctgccgatggggtgacggtccgccccgag
ctgcccgacggcgagcgcctggagcagctcgtccggttgctgggcgagcccccggcctga
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