Kytococcus sedentarius: Ksed_21590
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Entry
Ksed_21590 CDS
T00974
Name
(GenBank) DNA/RNA helicase, superfamily II
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
kse
Kytococcus sedentarius
Pathway
kse03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
kse00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Ksed_21590
09124 Replication and repair
03420 Nucleotide excision repair
Ksed_21590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
kse03021
]
Ksed_21590
03400 DNA repair and recombination proteins [BR:
kse03400
]
Ksed_21590
Enzymes [BR:
kse01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Ksed_21590
Transcription machinery [BR:
kse03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
Ksed_21590
DNA repair and recombination proteins [BR:
kse03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
Ksed_21590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ACV07146
UniProt:
C7NLF0
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All DBs
Position
2236749..2238401
Genome browser
AA seq
550 aa
AA seq
DB search
MTGPLIVQSDKSVLLEVDHDGYEAARRAIAPFAELERAPEHVHTYRITPLALWNARAAGL
DAEQVVDALVTHSRFPVPQPLLIDVAETMDRYGRLTLEQHPTAGLVLHSTDPAVLTEVRR
HKKIAPMLGADVDAATVAVHPSERGAIKSELINVGWPADDKAGYVDGEAHPIGLEGDWGL
RPYQEHAVDGFTDGGSGVVVLPCGAGKTLVGAGAMARQETTTLILVTNTMSARQWKAELL
RRTTLTEEEIGEYSGTVKEVRPVTIATYQVLTTRRKGVYTHLDLLDARDWGLIIYDEVHL
LPAPIFRMTADLQARRRLGLTATLVREDGRENEVFSLIGPQRYNAPWKDIEAQGWIAPAD
CVEVRTTLPESERMAYATAEADQRYRLAACADVKLPVLDRIVEHHAGEATLVIGQYLDQL
EEIAGRLDCDIITGETPQKERGRLFEAFRSGEITRLVVSKVANFSIDLPEASVAIQVSGT
FGSRQEEAQRLGRVLRPKSDGRTAHFYTVVTRDTVDAEFAAHRQRFLAEQGYAYRILDAE
EVPDALVTGD
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atgaccggccccctcatcgtccagagcgacaagtccgtcctcctcgaggtcgaccacgac
ggctacgaggccgcccgccgcgccatcgcacccttcgccgagctcgagcgcgcccccgag
cacgtgcacacctaccgcatcaccccgctcgccctgtggaacgcccgcgccgccggcctc
gatgcggagcaggtggtcgacgcgctggtcacccacagccgcttccccgtaccgcagccg
ctgctcatcgacgtggccgagacgatggaccgctacggccgcctcaccctggagcagcac
cccacggccggcctggtgctgcactccaccgaccccgccgtgctcaccgaggtgcgccgc
cacaagaagatcgccccgatgctgggagcggacgtcgacgccgcgacggtcgccgtgcac
ccgtccgagcgcggtgccatcaagagcgagctcatcaacgtgggctggcccgccgacgac
aaggcgggctacgtcgacggcgaggcccaccccatcgggctcgagggcgactggggcctg
cgcccctaccaggagcacgcggtggacgggttcaccgacggcggctccggggtggtcgtg
ctgccctgcggggccggcaagacgctggtgggcgccggggcgatggcccgccaggagacc
accacgctgatcctggtgacgaacacgatgtcggcccgccagtggaaggccgagctgctg
cgccgcaccaccctcaccgaggaggagatcggcgagtactccggcaccgtcaaggaggtc
cgcccggtcaccatcgcgacctaccaggtgctcaccacgcgccgcaagggcgtctacacc
cacctggacctgctggacgcccgcgactggggcctgatcatctacgacgaggtgcacctg
ctgcccgcgccgatcttccgcatgacggccgacctgcaggcccgccgtcggctggggctc
acggccaccctggtgcgcgaggacggccgcgagaacgaggtgttcagcctcatcggcccg
cagcgctacaacgcgccgtggaaggacatcgaggcccagggctggatcgccccggcggac
tgcgtggaggtgcgcaccaccctgccggagtccgagcgcatggcctacgccacggccgag
gccgaccagcgctaccggctcgccgcctgcgccgacgtgaagctgccggtgctcgaccgc
atcgtggagcaccacgccggcgaggcaaccctggtgatcggccagtacctcgaccagctc
gaggagatcgcgggccggctggactgcgacatcatcaccggggagacgccgcagaaggag
cgcggccggctgttcgaggccttccgctccggggagatcacccgcctggtggtcagcaag
gtggccaacttctccatcgacctccccgaggcctcggtggccatccaggtctccggcacc
ttcggctcacggcaggaggaggcccagcggctcggccgcgtgctgcgcccgaagagcgac
ggccgcaccgcgcacttctacaccgtcgtcacgcgggacaccgtcgatgcggagttcgcc
gcccaccgccagcgcttcctcgccgagcagggctacgcctaccgcatcctcgatgccgag
gaggtgccggacgcgctggtgaccggcgactga
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