Kwoniella shivajii: 87952312
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Entry
87952312 CDS
T10982
Symbol
IL334_000181
Name
(RefSeq) uncharacterized protein
KO
K02330
DNA polymerase beta [EC:
2.7.7.7
4.2.99.-]
Organism
ksh Kwoniella shivajii
Pathway
ksh03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ksh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
87952312 (IL334_000181)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ksh03400
]
87952312 (IL334_000181)
Enzymes [BR:
ksh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
87952312 (IL334_000181)
DNA repair and recombination proteins [BR:
ksh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Short Patch-BER factors
87952312 (IL334_000181)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
87952312 (IL334_000181)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B_palm
DNA_pol_B_thumb
DNA_pol_lambd_f
NTP_transf_2
DUF4332
Motif
Other DBs
NCBI-GeneID:
87952312
NCBI-ProteinID:
XP_062788018
LinkDB
All DBs
Position
1:join(460416..460776,460859..460948,461027..461142,461226..461365,461460..461544,461640..461745,461808..461883,461970..462100,462192..462403,462583..462630,462705..462725,462926..462973)
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AA seq
477 aa
AA seq
DB search
MIMSSSHSILSSSKHILNPLSRGVDRFKTLSTLINFNPNPTKQNGYSVTSHYTPDGSYEG
GMINHKRGFSMTSILERSIEEAKKDQIKDMVKGFDLKVDIEPPSTMRIKYLKGIKQDYAD
TYKDLTVPTKELLEALRDMQSWRQLTPQTSKAVDYRDSLRCISLLAGPDGGISKPVLKLT
DIEKVLSDEYGVTWRLIRHLIEHGLVPELEALDDQWKAMVKFNRVHGFGKVKAQAYIDAG
ARTLEDLYHSKDKEFGRKVSDAQKLAIKYHKEMDLMIPRSEVEEFERLIRDALRKVDLTL
GFAIMGSYRRGEYVSSDIDMVVWHDSFLRRDRDEKSRKGGYLPDSLMGKVMGALINEGLI
EGDKLFSRGEKKVLALTRLPTSNSVHRQIDIRLCPLESLPYMLLGNTGDDRLMKSLRYRA
VQKGWVLNEYAMGERVEGSDGGEIIVNSEKEIFDKLDLPYLEPTMRSYHKYRHVLHI
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgatcatgtcttcttctcacagcatactcagcagctccaaacatatcttgaatccacta
tcaagaggtgtagatcgatttaagacattatcaacattgatcaatttcaatcccaaccct
accaaacagaatggatattctgtcacatctcattacacccccgatggatcgtatgagggt
gggatgatcaatcataagaggggattctcaatgacttcgattctggagagaagtattgag
gaagctaagaaagatcaaatcaaagatatggttaaaggtttcgatctaaaagttgatatc
gaacctccttcaactatgcggatcaaatacctcaaagggataaaacaagattatgctgat
acatacaaagatctcactgtacctacaaaagaattattggaagctctgagagacatgcaa
tcgtggagacagttaacacctcaaacttccaaggcggtagattatcgtgattcactaaga
tgtatctcgcttttagctggaccagatggtgggatcagtaaaccagttctaaaattgacg
gatatcgaaaaagttttatctgatgaatacggtgtgacatggaggcttatacgacatctg
attgagcatggtctagtacctgaactagaggctttagatgatcaatggaaagccatggtg
aaattcaacagagtacatggattcggtaaagtcaaagctcaagcttatatcgatgcggga
gcaaggacacttgaagatttatatcactcaaaagataaagagtttggtaggaaagtatct
gatgctcaaaagctggcgattaaatatcacaaagagatggatctcatgattcctagatct
gaagtagaagaattcgaaagattaatcagagatgcattgagaaaagttgatttgaccctc
ggattcgctatcatgggatcatacagaagaggcgaatatgttagcagtgacattgatatg
gttgtatggcatgattcgttccttcgtagagacagagatgagaaatcgagaaaaggagga
tatctgcctgatagcctgatgggaaaagtcatgggtgctctgataaatgagggattgatt
gaaggagataaattattctccaggggagagaagaaagttttagctttgactagactccct
acctcgaactctgttcatcgccaaatcgatatcagattatgtccacttgagagtctacct
tatatgttacttggtaacacaggggatgatagactgatgaaaagcctaaggtatagagca
gtacaaaaaggatgggtgttgaacgagtacgccatgggtgaaagagtggaaggtagcgat
ggtggtgaaatcatcgtcaatagtgaaaaagagatatttgacaagctcgaccttccttac
cttgagccaacaatgagatcctatcacaaatacagacatgtcctccatatctag
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