Kwoniella shivajii: 87952386
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Entry
87952386 CDS
T10982
Symbol
IL334_000255
Name
(RefSeq) uncharacterized protein
KO
K18716
nucleoporin NUP42
Organism
ksh Kwoniella shivajii
Brite
KEGG Orthology (KO) [BR:
ksh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ksh03019
]
87952386 (IL334_000255)
Messenger RNA biogenesis [BR:
ksh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
87952386 (IL334_000255)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
zf-CCCH_4
zf_CCCH_4
zf-CCCH_10
zf-CCCH_2
Torus
Motif
Other DBs
NCBI-GeneID:
87952386
NCBI-ProteinID:
XP_062788090
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All DBs
Position
1:complement(join(651764..653350,653408..653576,653643..653744,653797..653831))
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AA seq
630 aa
AA seq
DB search
MSQPVCRDFINGYCRFGTSCKFYHPPREQAGNQQRAVSSASKYQFNQDTIRQDLTIEKPI
YIISNYAAAKHEPSLFFGYDLSPEELRWKSVIALKEGKVQEYVNEENTLMNQANSTITQA
VANLSATVKVAEQLHNTRFTGNSIPGDPRPSEFSEAAALGSNPPAAVASGPSFGGSRGSF
GGNKPNAFGAASTGSGGFGQSSFGSSSKPSGFGSSAFGSSGTSGSAFGSSGSTNSAFGSQ
KPPASAFGSTPPSNTGGAFGQSGFGAKPAGSAFGSSGFGSTTSTASAFGSTSTATPSAGS
AFGQSGFGAKPAPSAFSGTPTSSAFGSTSKPSGFGASSTPSSGFGASAFGSNPASTSTFG
SSPAPAFGSTSTPTAPSASAFGSTSASTAGSAFGSSGFGSTATTTAPVSGSAFGQSGFGS
SGFGQPAKTGAFGASSQPQNPTTSAFGGFGQASSPATAGAFGAFSNNNNSASSAPPDAPN
NANPFAASAPPTNPFAQPNQPPQPTDPSSAPVISFGAKSTSAFGNASAFGQKSTQTAPSA
FGNSSAFGNPSPFGTQSTQQGSNGFGNAQQPQGDVPPGWSYDDPWSYLLPTENGNESGGK
LEEDFVRAFKDGGFSLSEIPIIPPPVELRV
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atgtctcagccagtctgccgagattttatcaatggctattgccgattcggtacttcgtgc
aaattctatcatcctccaagagaacaagctggaaatcaacaaagagctgtatcttcagca
tctaaatatcaattcaaccaagatactatacggcaagatctgaccattgagaaaccgata
tatatcatatcgaattatgccgctgctaaacatgagccaagtttgttctttggatacgat
ctttcaccggaagaattgagatggaaaagtgtaattgcattgaaggaagggaaagtacaa
gaatatgtaaacgaagagaatactctgatgaaccaagccaactccacgatcacccaagca
gtcgccaacctatcagctacggtcaaagtagccgaacaactgcacaacacccgtttcacg
ggaaactctattcctggtgatcctcgtccttcagagttctctgaagcagctgctctagga
agcaatcctcctgcagccgttgccagtgggccaagcttcggtggaagtcgaggatcgttt
ggaggcaataagccaaatgcttttggcgcagcgagtacgggtagtggaggttttggtcaa
agttcttttggaagttctagtaaaccatcaggatttggatcaagtgctttcggatcgagc
gggacatcaggatctgctttcggctcgagtggatcaacaaattcagcgttcggttcacaa
aagcctcccgcgtctgcatttggtagtacgccacctagcaacacaggaggcgctttcggt
caatctggtttcggagcaaaacctgctgggtctgcttttggttcctcaggattcggttcg
acgacctctaccgcttctgcgtttggatcaacatccactgctacaccctctgcaggatct
gcgttcggtcaatctggattcggagctaagccagcaccatcagcatttagtggtacaccc
acttcttctgctttcggatcaacctcgaagccttctgggttcggcgcatcttccactccc
tcatcaggcttcggagcatcagcttttggttccaacccagcaagtacgtctacatttggt
tcttcgcctgcacccgcatttgggagcacgtccacgcccactgctccttcagcttcagca
ttcggtagcacatctgcatcaactgctggttctgctttcggatcatcaggatttggttca
acagcaacgactactgcacctgtatcgggatcagcctttggacaatccggatttggaagt
tcaggtttcggtcaaccggccaaaacaggtgcttttggagcatcatcccaaccgcaaaat
cccacaacatcggcatttggtggattcggccaagcttcatcgccagcaacggctggagca
tttggagcattctcgaataataataattctgcctcgtctgcaccgccagacgctccgaac
aacgcgaatcctttcgctgcctctgcacctcctacaaatccattcgctcaacctaatcaa
cctcctcaacctacagacccttcttctgcacctgtaatttcatttggagcgaagtccacc
tctgcattcggcaacgcgagtgccttcggtcagaaatccacccaaaccgcaccctcagct
ttcggtaattcgtcagcatttggcaatccttcacctttcggtacacagtcaacgcagcaa
ggatccaatgggtttggaaatgctcagcagcctcaaggagatgtaccgccaggatggtcc
tatgacgatccatggagttatctcctacctacagagaacggaaatgagagcggcgggaag
ctggaagaggatttcgttagagcgttcaaggacggtggattcagccttagtgagataccg
ataataccaccgcccgtcgaattgagggtataa
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