Kwoniella shivajii: 87952405
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Entry
87952405 CDS
T10982
Symbol
IL334_000274
Name
(RefSeq) uncharacterized protein
KO
K03361
F-box and WD-40 domain protein CDC4
Organism
ksh Kwoniella shivajii
Pathway
ksh04111
Cell cycle - yeast
ksh04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ksh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
87952405 (IL334_000274)
09140 Cellular Processes
09143 Cell growth and death
04111 Cell cycle - yeast
87952405 (IL334_000274)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ksh04121
]
87952405 (IL334_000274)
Ubiquitin system [BR:
ksh04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
87952405 (IL334_000274)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
Beta-prop_IFT122_1st
Beta-prop_THOC3
WD40_Prp19
Beta-prop_WDR3_2nd
WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_WDR36-Utp21_2nd
EIF3I
Beta-prop_TEP1_2nd
WDR55
Beta-prop_TEP1_C
WD40_Gbeta
Beta-prop_EML
DSE1_N
Beta-prop_SCAP
Beta-prop_WDR41
Beta-prop_EML_2
NBCH_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR36-Utp21_1st
ANAPC4_WD40
Beta-prop_WDR75_1st
ASA1
Beta-prop_WDR90_POC16_2nd
Beta-prop_ACSF4
F-box-like
Beta-prop_DCAF12
WD40_MABP1-WDR62_1st
Beta-prop_Nup120_160
Beta-prop_RIG_2nd
TRM82_WD
CFAP251_N
Beta-prop_VPS8
Beta-prop_EIPR1
WDR90_beta-prop_4th
Beta-prop_SPT8
Beta-prop_NOL10_N
Beta-prop_LRRK2
WD40_like
Beta-prop_DCAF4
PAC11
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
Beta-prop_Aladin
PQQ_2
PAN2_N
Beta-prop_Vps41
PEP5_VPS11_N
F-box
Beta-prop_HPS5
DUF3011
Motif
Other DBs
NCBI-GeneID:
87952405
NCBI-ProteinID:
XP_062788109
UniProt:
A0ABZ1CNP6
LinkDB
All DBs
Position
1:join(714140..714593,714678..714865,714970..715354,715449..716718,716814..717210)
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AA seq
897 aa
AA seq
DB search
MSSSSSPNQSSRPTTLPLIPQQPHWTKPPPSPPSLTPLTTTSFSRSSIGDASIALSSLSI
SINNQQPIVPLPTPSPGISQITNANTNTNTNPTQNGLSPPTPAPSPSPSPRDKRTFRHSH
NNDNDDDDNDNSDEELMDRIWKGKNRQHVISDPQDLIYRFTSLSPSQRFSFLTSLVGELR
LNEALVVSRKIEPLLRRDFLRELPAELALHCLSFVDEPKTLARAAQVSHYWNQLLQDEQT
WKDLFDRHDFPTPTSFIHRPIGLRSRSATQSFANANTNNPFSVVNGSINVGTNTRTSNSQ
QSCINRATPFGLERRVLTLASSRLRDKEDGTFKGRFKNAYLTESNWLSGGRILANHVSAD
DAVVTTLCFDDSHIVVGMANNKIHVFDAITGTFLRSLLGHRQGVWAMVLVSANRAGTGTG
TGSAFDVDDDVNDDDASEDSFEDRIDPNSRRFGQNQGHSENFWNGHGRASDSYRDNGQSR
RSSFAGGTTTERHPPLGSSSSHHNNNSNGNGNGDHHDYPGFGQNLNSSSPGGIFPQSQIN
QPARPNTAMGFTPLPNGLLGLGIGNSNSRGDNLPFSASATSINIPALGESASSSTPQDDE
EMKNKKMRSSDPCGCARGWKGNRNNLVVSAGCDKEVKVWNLDTGELLHSMRGHTSTIRCL
KVLDKRPVAISGSRDHTLRVWDIENGHLLHVLAGHEESVRCVEIAGNMAVSGSYDYTARL
WNLDTGECAHVLRGHYHQIYSVAFDGQMVVTGSLDSTIRVWSAATGDCLALLQGHTALVG
QLQLSSSRLITGGSDGRVIIFDLSTLTTSHRLCAHDNSVTCLQFDDRFIVSGGNDGRVKL
WDVKSGRFVRELTRPCDAVWRVGFRSDRVVLLCQREGRTCLEVISFRPGEGERRARS
NT seq
2694 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcttcatcttcacctaatcaatcgtcgcgacctactactttacctttaatacct
caacaaccacattggacaaaaccaccaccatcaccaccttcacttactccattaacgaca
acttcgttctctagatcatctattggtgacgcttcaatagcactgtcatctctctcaata
tcgattaataatcagcaacctatcgtaccattacctacaccttcacctggtatatcgcaa
attaccaacgccaacacaaatacgaatacgaatccaactcagaatggattgagcccacct
acaccagctccaagtcccagtcccagtccgagagataagaggacattcaggcatagtcat
aataatgataatgacgatgacgataacgataactcggatgaagagttgatggatcgtata
tggaaagggaagaatagacaacacgttatttcagatccacaagatcttatatatcgattt
acatcactttcaccctctcaacgattctcgtttctcacttccctagtaggagaattgaga
ctgaatgaagctttggtcgtatcaaggaaaattgaacccttgctacgaagagatttcttg
agagaattgcctgcagaattagcattacattgtttgagctttgttgatgaaccaaaaact
ctagctcgagctgcacaagtctctcattattggaatcaactattacaagatgaacaaact
tggaaagatttgtttgatagacatgatttcccaacaccaacttcattcatacatagacca
ataggactcagaagtagaagtgcaactcaatctttcgcaaatgcaaataccaataatccc
ttctctgtcgtcaacggtagcataaacgttggcacaaacacaaggactagcaatagtcaa
caaagttgtatcaatagagcaacacctttcgggttagaacgaagagtattaactttggct
agttctagattaagggataaagaggatggtacctttaaaggtagattcaagaatgcttat
ctgactgagtcaaactggttatccggtggtcgaatattagcaaatcacgtatctgccgat
gatgcagtagtaaccacattgtgtttcgatgattctcatatagtagtcggaatggccaat
aacaaaattcacgtgtttgacgctatcaccggaacgtttttacgttctttattgggtcac
agacaaggtgtttgggcaatggtattagtttctgcgaatcgagcgggaacaggaacaggg
acaggatcagcctttgatgtcgatgacgatgtcaacgacgatgatgcatctgaagatagt
ttcgaagacagaattgatccaaattcaagaaggtttggtcaaaatcaaggacattccgaa
aatttctggaacggacatggaagagcatcggattcatatagagataatggtcaatccaga
agatcatctttcgcaggtggaacaacaactgaaagacatccacctttgggttcatcttca
tcccatcataacaataacagtaacggtaacggtaacggtgatcatcatgattatccagga
tttggtcaaaaccttaattcatcttcacccggtggtatatttcctcaatcacaaatcaat
caacctgctagaccaaatactgcgatgggattcacacctttacccaatggattattaggt
ttgggcataggtaattctaattctagaggagacaatctaccattttcagcttcggctaca
tctatcaatatacctgctttaggtgaatcggcttcatcgtcaacaccacaagatgacgaa
gaaatgaaaaacaagaagatgaggtcaagtgatccatgcggatgtgcaagaggatggaaa
ggtaacagaaacaatttagttgtttcagcaggatgtgacaaagaagtcaaggtatggaat
ttagatactggtgaattactccattcgatgagaggtcacacgtcaacaataagatgtttg
aaagtattagataaacggccagtggcaatatcaggctcaagagatcatacactacgagta
tgggatatcgaaaacggtcacttgctacatgtattggcaggtcatgaagaatctgtcaga
tgtgtggaaatagctggaaatatggccgtttcaggttcatatgattatactgcaagatta
tggaatcttgatacaggtgaatgtgcacatgtattaagaggccattatcatcagatttat
tctgttgcttttgatggtcaaatggttgttactggtagtttggatagtacgatcagggtt
tggagtgccgctactggcgactgcctagcacttcttcaaggtcatacagcacttgttggt
caacttcaattatcttcatctcgattaatcaccggtggatcagatggacgagttatcata
tttgacctttcgactctaactacgtcacatcgattatgcgctcatgacaattcagtcaca
tgccttcaattcgatgatcgattcatagtctcaggcgggaatgacggtcgagtgaaactt
tgggatgttaaatcaggtagattcgtaagagaattgacaagaccttgtgacgctgtctgg
agagttggtttcagatccgatagagtcgtcttgctatgtcaaagagaaggtagaacctgc
ttggaagtcattagtttcagacctggtgaaggtgaaagaagggctagatcatag
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