Kwoniella shivajii: 87952406
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Entry
87952406 CDS
T10982
Symbol
IL334_000275
Name
(RefSeq) uncharacterized protein
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
ksh Kwoniella shivajii
Pathway
ksh03082
ATP-dependent chromatin remodeling
ksh03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ksh00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
87952406 (IL334_000275)
03083 Polycomb repressive complex
87952406 (IL334_000275)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ksh03036
]
87952406 (IL334_000275)
Enzymes [BR:
ksh01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
87952406 (IL334_000275)
Chromosome and associated proteins [BR:
ksh03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
87952406 (IL334_000275)
HDAC complexes
Sin3A-HDAC complex
87952406 (IL334_000275)
BRAF-HDAC complex
87952406 (IL334_000275)
REST complex
87952406 (IL334_000275)
SHIP complex
87952406 (IL334_000275)
MiDAC complex
87952406 (IL334_000275)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
87952406 (IL334_000275)
Heterochromatin formation proteins
Other heterochromatin formation proteins
87952406 (IL334_000275)
Chromatin remodeling factors
NuRD complex
87952406 (IL334_000275)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
DUF7209
Motif
Other DBs
NCBI-GeneID:
87952406
NCBI-ProteinID:
XP_062788110
LinkDB
All DBs
Position
1:complement(join(717853..718337,718422..718573,718738..718827,718892..718975,719044..719119,719185..719293,719357..719449,719510..719651,719706..719732,719800..719911,719995..720069,720157..720274,720387..720707))
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AA seq
627 aa
AA seq
DB search
MSVADPSSSSTAEGSSNQPSRRVAYYYDQDVGNYHYYLGHPMKPHRIRMAHNLIVNYGLA
DEVEDDAPEVNGEGKRELNDVIQDNRPEEKFIKNSLRGSRSKSMQVFRPHRATKSEMTRF
HTDEYIEFLENVTPETAEAMTGGGVRCLIGEDCPAFEGLFEFCSISAGGSLGAAERLNSG
AADIAINWAGGLHHAKKTDASGFCYINDIVLGILELLRIHPRVLYIDVDVHHGDGVEEAF
YTTDRVMTCSFHRFGEFFPGTGDVRDVGMKRGKGYAVNVPLRDGITDESYHTIFKPVIQH
IMDYFRPGAVVLQMGADSLSGDKLGGFNLTLNGHGECTKFVKSFGVPVMMLGGGGYTTKN
VARAWTNETAVMCGRELPEDLPYNQYMEYYGPRYKLEVLANNTDDHNPSEYLDKIRTQVI
ENLRNLPHAPSAQMRQVPSQSISRAIGLTKDIDENDPEDEIDLRVRKYMQRKQLNGGYSP
NSSDDDDIPMNGDSEDDSSAFAIPGRSRRQAGQPTRRSIIPRQISAAKRHTNNNEYDSDD
DEDQDPCGTNNKKKKRSFFNNSNNGIKSNVNLLIKKKLNGISNPIPITIGQNGVVEFWKE
SNLQPGANGIIAGAGGISRGESPMSIS
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atgtcagtagcagatccttcatcgtcttcaacagctgaaggatcatcaaatcaaccttca
aggagagtagcttattattatgatcaagatgtggggaactatcattattaccttggacat
ccaatgaaaccacatcgtataagaatggcccataacttgattgtgaattatggactagca
gatgaagtagaggatgacgctcccgaagtcaacggagaaggtaaaagagagttgaatgat
gtgattcaagataatagaccagaagagaaatttataaaaaatagtttaagaggatcaaga
agtaaatccatgcaggtttttagaccacatagagcgacaaaatctgaaatgacacgcttt
catacggatgaatacattgaattcttagaaaacgttactccagaaacagcagaagcaatg
acaggaggtggtgtaagatgtctgataggcgaagattgtcctgcatttgaaggattgttt
gaattctgttctatatcagcaggaggttcactaggcgctgccgaaagactcaattcagga
gcagcggatatagctatcaactgggcaggaggtttacatcatgctaagaaaacagacgcg
agtggattctgttatataaatgatattgtactaggaattctagaactactgaggatacat
cctcgtgtgctatacattgacgttgacgtacatcatggagatggagttgaggaggctttc
tatactacggatagagtcatgacctgctccttccataggtttggagaattcttccctggt
acaggagatgtcagggatgtgggcatgaaaagaggtaaaggatacgcagtgaacgttcct
ctgagggatggaataacggatgaatcatatcatactatattcaaacccgtcattcaacat
atcatggactatttcagacccggagcagtcgtgttacaaatgggagcagatagtctttct
ggagataaattaggtggattcaatctgactttaaatggacatggtgaatgtacgaaattc
gtgaaaagcttcggtgtccccgttatgatgcttgggggaggtggatatacgaccaaaaac
gtagcgagagcttggacgaacgaaactgccgtcatgtgtggtagggaattacctgaagat
ctaccttataatcaatatatggaatattatggtcctcgatataaactagaagtgttggcg
aataatacggatgatcacaacccttctgaatatttggataaaatcagaacacaagtaatt
gagaatctacgaaatctgcctcatgcaccttctgcacaaatgcgtcaagtaccctcgcaa
tctatctcgagagccataggtttgacaaaagacattgacgagaatgacccggaagatgag
attgatttgcgcgtgaggaaatacatgcagagaaaacaactgaacggaggctattcacct
aattcctcagatgatgatgatatacctatgaatggagattcagaagatgattcttcagca
tttgcgattccaggtagatcgaggcgtcaagcaggtcaaccaacaagaagatcaattatt
ccacgtcagatatcagctgcgaagagacacacaaataacaatgaatatgattcggatgac
gacgaagatcaagatccatgtggaaccaataacaagaagaagaagagatcttttttcaac
aacagcaataatggaataaaatccaatgtgaacctactcatcaagaagaagttgaacggt
atatcgaatcctatcccaattacaataggtcaaaatggtgttgttgaattttggaaagaa
tcaaatttgcaacctggtgcgaatgggattatagctggagctggagggatctcaagaggt
gaaagtccgatgagtatctcgtag
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