KEGG   Kwoniella shivajii: 87952753
Entry
87952753          CDS       T10982                                 
Symbol
IL334_000622
Name
(RefSeq) pre-mRNA-splicing factor CEF1
  KO
K12860  pre-mRNA-splicing factor CDC5/CEF1
Organism
ksh  Kwoniella shivajii
Pathway
ksh03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ksh00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    87952753 (IL334_000622)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ksh03041]
    87952753 (IL334_000622)
   03400 DNA repair and recombination proteins [BR:ksh03400]
    87952753 (IL334_000622)
Spliceosome [BR:ksh03041]
 Complex B
  Other components
   Prp19 complex
    87952753 (IL334_000622)
 Complex C
   Prp19-CDC5 complex
    87952753 (IL334_000622)
DNA repair and recombination proteins [BR:ksh03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    87952753 (IL334_000622)
SSDB
Motif
Pfam: Myb_Cef Myb_DNA-binding Myb_DNA-bind_6 TPR_HPS5_insect
Other DBs
NCBI-GeneID: 87952753
NCBI-ProteinID: XP_062788439
LinkDB
Position
1:join(1625827..1625829,1625902..1625985,1626080..1626187,1626249..1626528,1626612..1626759,1626823..1626856,1626916..1627378,1627440..1628749,1628827..1628937)
AA seq 846 aa
MVRIIIKGGVWRNTEDEILKAAISKYGKNQWARISSLLVRKTPKQCKARWYEWLDPSIKK
VEWSKTEDEKLLHLAKLMPTQWRTIAPIVGRTATQCLERYQKLLDDAESKDNEELGLGAG
ENDEARPAADVRGLKPGEIDTDPETRAARPDPIDMDDDEKEMLSEARARLANTQGKKAKR
KARERQLEEARRLAFLQKKRELKAAGINLRPKKKKNGMDYNADIPFEKQPAPGFYDVAEE
NAKVYAAPVGQSLRALEGKRKQELEELEEKKKRSKGNDGKSNQTAQFVQAREAQIKKLKE
QEQIIRRRKLNLPTPQVGEQELEDIVKIGQAGELARELVGGEGSGSKATEGLLGEYEALG
RAKMARTPRTGPQQDNVMAEARNLRAMISAQTPLLGDENTPLHGGDAGGTGFEGATPRHG
VAPTPNPLATPARGGVLATPRTVAGVGATPSRTPRDNLSINDGESIYGETPRDEKRRVAD
ARRALRAGFASLPKPENNFELAETEEDEEEDEETIPLSEEDAAERDRRLRAARELEERLE
LERRSSVVKKGLPRPINVNTYKVLDELNSVEADADSIMAAAFRLVNLEVAMLMKHDSIAH
PLPGTSVPGGSASDYDMPEDDFVSAAKQAIHAELAGALGLPGATDEQLRIAVGSTVEDNL
EAFSSSWAEEQEDLIYSPSSRKWIEKSSLSPEELSACYAAAITVSKERVISEATKASKAE
KKLSKQLGGYQAINAKAKKSILETMEEIQQAQRDLETFTMLRTLEEAGAPARLEKLREEV
AILEKRERDLQARYAELNDERRERTSAIEQLEEDKVVLQAQAALDALEGEGEGEGEVDGD
VEMNGD
NT seq 2541 nt   +upstreamnt  +downstreamnt
atggtccgaatcatcatcaaaggtggtgtatggagaaacacagaagatgagatattgaaa
gctgccatttcgaaatatggaaagaaccaatgggctcgtatctcatctctgctagtccga
aaaacgcctaaacaatgtaaagcacggtggtatgaatggttagatccttccatcaagaaa
gttgaatggtcaaaaactgaagatgaaaagctgttacatttagctaagttgatgcctaca
caatggcgtactatagcccctatagtaggtagaacagcgactcaatgcttggagagatat
cagaaattattagatgatgcagaatcaaaagataacgaagaattaggtttgggtgcggga
gaaaatgatgaagctcgtccagcagcggatgtaagaggtttgaaaccaggtgaaattgat
acagatccagaaactagagctgcgagacctgatcctatagatatggatgatgatgagaaa
gaaatgttatctgaagcaagagcgagattggcaaatactcaaggaaaaaaagctaaaaga
aaagctagagagagacagttggaagaagcgagaaggttggctttcttacagaagaagaga
gaattgaaagccgccggtatcaaccttcgacccaagaagaagaagaatggtatggactat
aacgccgatattcccttcgagaaacaaccagctccaggattctacgatgtggccgaggag
aacgccaaagtctacgctgcaccagtcggtcaatcactgcgagcgttggaaggaaagaga
aagcaggaattagaagaattagaagaaaagaagaagcgttcaaagggtaatgatggaaag
agcaatcagaccgctcaattcgtacaagccagagaagctcaaatcaaaaagctgaaagag
caagaacagatcatcagaagacgaaaactgaatctcccaactccccaagtcggagaacaa
gaactggaagatatagtcaagattggtcaagccggtgaattagctcgagaattggtcggt
ggtgaaggatcaggaagtaaagcgactgagggtttgctgggagaatacgaggctttggga
agagctaaaatggcaagaacacccagaacaggacctcaacaggacaacgtaatggctgaa
gctcgaaatctccgtgcgatgataagcgcacagactcctcttcttggggatgagaatact
cctcttcacggtggtgatgcaggtggaaccgggtttgagggtgctacccctcgacacggt
gttgctccaacgcccaatccattggccacacctgctcgcggcggtgtactcgctactcct
cgaacagtggcgggcgtaggtgctactccatcccgaacaccgcgagacaacctcagtatc
aatgatggagagtcaatttacggtgaaactccccgagatgagaaacgacgtgtagccgat
gctcgacgagctctgagggctggatttgcttccttgcccaaacctgagaataacttcgaa
cttgccgaaactgaggaggacgaggaagaggatgaggaaacgatacctttgtcagaagaa
gatgcagcggagagagataggcgattaagagctgcacgagagctagaagagcgattggag
cttgaacgacgaagctcagtggtgaagaaaggattacctcgtccgatcaatgttaatacg
tacaaggtcttagacgagctcaactcggtagaagcggatgccgactccatcatggcagct
gcattcagattggtgaatttggaagtcgccatgttgatgaaacacgactccattgctcac
cctcttcccggaacgtcagtacctggtggatcggcgtctgattacgatatgcccgaggac
gattttgtctcagctgcaaagcaagctattcatgccgaattagccggtgctttaggtctt
cccggagctacagacgagcaacttcgtatcgctgttggatcaaccgttgaagacaacctc
gaagcattctcatcaagttgggccgaagaacaagaagatctaatatattcaccttcttca
aggaaatggattgaaaaatcctctctttcacccgaggaattatcagcttgttacgcggct
gctataactgtatctaaagaacgagtcattagtgaagctacaaaggcatctaaagcggaa
aagaaattatcaaaacaattaggtggatatcaagctataaatgccaaagctaaaaaatca
attctggaaactatggaagagattcaacaagctcaaagagatttagaaactttcacgatg
ttacgtacattggaagaggctggtgcacctgcaagattagaaaaattgagagaagaagta
gcaatactagaaaagagggaaagagatttacaagctcgatatgctgaattgaatgatgaa
agaagggaaagaacatcagccatcgaacagctcgaagaagataaagtcgtccttcaagct
caagctgctcttgatgcattagaaggtgagggtgagggtgaaggtgaagtagatggagat
gtggagatgaacggggattaa

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