KEGG   Kwoniella shivajii: 87952782
Entry
87952782          CDS       T10982                                 
Symbol
IL334_000651
Name
(RefSeq) uncharacterized protein
  KO
K10754  replication factor C subunit 1
Organism
ksh  Kwoniella shivajii
Pathway
ksh03030  DNA replication
ksh03410  Base excision repair
ksh03420  Nucleotide excision repair
ksh03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:ksh00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    87952782 (IL334_000651)
   03410 Base excision repair
    87952782 (IL334_000651)
   03420 Nucleotide excision repair
    87952782 (IL334_000651)
   03430 Mismatch repair
    87952782 (IL334_000651)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ksh03032]
    87952782 (IL334_000651)
   03400 DNA repair and recombination proteins [BR:ksh03400]
    87952782 (IL334_000651)
DNA replication proteins [BR:ksh03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    87952782 (IL334_000651)
DNA repair and recombination proteins [BR:ksh03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     87952782 (IL334_000651)
SSDB
Motif
Pfam: RFC1 AAA_lid_RFC1 BRCT AAA Rad17 nSTAND3 AAA_30 AAA_16 AAA_22 AAA_5 RuvB_N AAA_28 AAA_14 AAA_33 AAA_19 AAA_assoc_2 AAA_18
Other DBs
NCBI-GeneID: 87952782
NCBI-ProteinID: XP_062788468
UniProt: A0ABZ1CPQ6
LinkDB
Position
1:join(1693272..1693403,1693562..1693628,1693692..1693783,1693848..1694171,1694236..1694456,1694514..1694681,1694751..1695050,1695112..1695228,1695286..1695472,1695535..1695594,1695654..1695779,1695849..1695934,1695991..1696038,1696101..1696238,1696311..1696467,1696536..1696672,1696737..1696871,1696934..1697096,1697203..1697354,1697434..1697545,1697640..1697783)
AA seq 1021 aa
MPPSTPKSSGKKADSEDYSPKKSQEKKKAVKKDEKPAGRDIRGFGSQKPTGSSSTGNGTG
KKPITIDDSDEEEEIVEQKPTPKPTTSKHFAASSSSSKKPIVLDSDSDNTPAPAPTRSTA
SAKAKPPTPKSKPASTASSKRKVIKDSSDEEELEDIKPAKKRQSLAGGLSRATGKKSAYV
EESDSSEEEVKPKPKIRAKKEKSVTPMDVDESESSDGDDFIDDDEDDLPKKSKSKAKPKA
PPAKKPTPAKKPAPAAKAAKKELDEDEEKKEEKKPANPNWRAAAAARAAGPKNPGSKEIP
EGAPDCLAGLTFVFTGELDSLGRDEAMELVKRYSGKVTGAPSGKTSFVIVGDNAGASKLK
TIHEKKIPTMTEEEFFEFIRSRKGGQLDEKAMKAKQAEEKKIKQQAEEMEKREKEEEKER
KRKEKALQGTGIAAKKVAPASSQLWTTKYAPQNLKEVCGNKAPVERLGTWLQDWQKNYGY
GFKRPGKDGMGIYRAVLISGPPGIGKTTSAHLMAKQAGYNPIELNASDARSKKLVENATN
IDNTSLDGFFQGTGVQSTSVVDVRVDSRTCLIMDEVDGMSAGDRGGVGALNVLIKKTKIP
MILICNDRTLQKMKPLQSTTFNMTFRRPTPPEIRSRIMSILFKEKLKIPPNVVDELVKGV
NSDIRQVLNMLSTFKLSKDQMDFDEGKQLVKVNEKNTILTPFTIIDKLTGPYAFSKTSRE
TLNDRMEYYFHDFSFVPLFMQEHYLKTQPALTNNLNGPEQNLKHLELVSKAADSISDGDL
VDRMIHGSEQHWSLLPFHAVQSTVKPASLIYGPGRSTGASGPGAWGGPSFPQWLGQNSKQ
GKLQRQLTDIQIRMRLKVSGGRSEIREQYMPMLASKIVLPLVQRGTDAVEETIEYMDEYY
LSKDDWDAFVELGVDTMSENIISKKIPTATKSAFTRQYNKADHPIAFHKGDMFAASKKKI
ADMGPAPDNEDVFEEDEPVPDEPSDKGEDDDEEVNDVTKDKLIKAVKPKGATAKGKAKAK
K
NT seq 3066 nt   +upstreamnt  +downstreamnt
atgccaccatcgactcccaagagctcggggaagaaggctgattcggaagactactctcca
aagaagagtcaggagaaaaagaaagcagtgaagaaagatgagaagccggccgggagggac
ataagaggatttggatcccaaaaacccaccgggtcatcatcgactgggaatggaacaggt
aaaaagccgatcacaatagatgactcagacgaagaagaagagatagtggagcagaaacct
actcctaaacccacaacatcgaaacatttcgcagcttcatcttcatcatcaaaaaagccc
attgtcctcgactcagattctgataatacacccgctccagcccctaccagatcgaccgct
tcggcaaaagccaagcctcctacaccgaaatcgaagccagcttcgactgcttcaagcaag
agaaaggtcatcaaagactcatcagacgaggaagaactggaggatatcaaacctgctaag
aaaagacaatctctcgcaggtggactgagtagagcgaccggaaagaaatctgcctacgtt
gaggaaagcgatagtagtgaagaagaagtgaaacccaagccaaaaataagggcaaagaag
gagaaatctgttacgccgatggacgttgatgagagtgaatcatctgatggagacgatttc
atcgatgatgatgaggatgatctacccaaaaagagtaaaagcaaagcgaaaccaaaggcc
cctccagcaaagaaacctactcctgctaaaaagcctgcacctgcagccaaggcagcgaag
aaagagctggatgaagatgaagagaaaaaagaggagaagaagcctgctaaccccaactgg
agagcagctgcagcggctcgggctgcgggaccgaagaatcctggatcgaaggaaatacct
gaaggtgcacctgattgtttagcaggattgacttttgtctttaccggtgaattggatagt
ctaggtagagatgaagcgatggagttggtcaagcgatattctggcaaagtcaccggtgcc
ccttcaggtaaaacgtcttttgtcatagtcggtgataacgcaggagcatctaaacttaaa
acgatccatgaaaaaaagattccgacgatgacagaagaagaattcttcgagttcatccgt
tctagaaagggcggtcaattggatgaaaaggcgatgaaagccaaacaagccgaagaaaag
aaaatcaagcaacaggctgaggaaatggaaaaacgagaaaaagaggaagaaaaagaaaga
aagaggaaagaaaaggctctacaagggaccggtatcgctgcaaagaaagttgcacctgct
tcgtcccagctatggactacaaagtatgccccacagaatctcaaagaggtctgtggtaac
aaagctcctgtcgagagacttgggacatggttacaagattggcaaaagaattacggttac
ggattcaaaaggcctggtaaagatggtatgggtatataccgtgctgtactcatttccggt
ccccctggtattggcaagaccacttcggcacatctgatggcaaagcaagctggatacaat
cctatagaattgaacgctagtgacgctagaagtaaaaagcttgtcgagaacgctacgaac
atagataacacctctctagatggattcttccaaggtacaggagtacagagcacctcagtc
gtcgatgttcgagttgattcgcgtacatgtctcattatggatgaagttgacggaatgtcg
gccggtgatagaggtggtgtcggagctttgaacgtgttaatcaagaagacaaaaataccc
atgatattgatttgtaatgatagaacactacaaaagatgaaacccttgcaatccacgact
ttcaatatgaccttcagacgtccgacgccacctgagatccgatcaagaatcatgtccatc
ttgttcaaggagaaactcaagataccgccaaatgtcgtcgatgaattggtcaagggcgtc
aattcagatatccgacaggtactcaatatgctttcgacgttcaagctgagcaaagaccag
atggactttgatgaaggaaagcaactggtgaaagtgaatgagaagaatacgattctcaca
cctttcacgatcatcgataaacttactggcccgtatgctttctccaagacaagcagagaa
acactgaatgacaggatggaatactatttccacgatttcagctttgttccacttttcatg
caggagcattacttgaaaacgcaacctgctttgacgaataatctgaatggacctgaacaa
aatctgaaacatctggagctggtcagtaaggcagcagactcaatatcagatggtgattta
gtggatcgaatgattcatggatcggaacaacattggtcgttattacctttccatgcagta
caatccacagtaaagcctgcttccttgatttatggaccaggtagaagtacgggtgctagt
ggacctggtgcatggggtggtccttctttccctcagtggttgggtcagaattcaaaacaa
gggaaattacaaaggcaactcaccgatatccaaatacgtatgcgactcaaagtgtctggt
ggcaggagcgagatcagagaacagtatatgcccatgttagctagtaagatagtattacca
ctggtacagcgtggaacggatgctgtcgaagagaccatcgaatatatggatgagtattac
ctcagtaaagatgactgggatgcgtttgttgaacttggagtggatacaatgtctgagaat
atcattagtaaaaagataccgactgcgactaagagtgcttttaccagacaatataacaaa
gcagatcatcctatagcattccacaagggcgatatgtttgctgcttccaagaagaagatt
gcggatatgggtcctgcaccagacaatgaggatgtatttgaggaagacgagcctgtaccg
gatgaaccttcggataagggtgaagatgacgatgaggaagtgaacgacgtcacaaaagat
aaattgataaaagctgtgaaacctaaaggagcaacagcaaaaggtaaagcgaaagccaag
aaatag

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