KEGG   Kwoniella shivajii: 87952786
Entry
87952786          CDS       T10982                                 
Symbol
IL334_000655
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A
  KO
K02324  DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
Organism
ksh  Kwoniella shivajii
Pathway
ksh03030  DNA replication
ksh03410  Base excision repair
ksh03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ksh00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    87952786 (IL334_000655)
   03410 Base excision repair
    87952786 (IL334_000655)
   03420 Nucleotide excision repair
    87952786 (IL334_000655)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ksh03032]
    87952786 (IL334_000655)
   03400 DNA repair and recombination proteins [BR:ksh03400]
    87952786 (IL334_000655)
Enzymes [BR:ksh01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     87952786 (IL334_000655)
DNA replication proteins [BR:ksh03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    87952786 (IL334_000655)
DNA repair and recombination proteins [BR:ksh03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      87952786 (IL334_000655)
SSDB
Motif
Pfam: DUF1744 POL2_thumb DNA_pol_B_exo1 DNA_pol_B zf-DPOE zf_DPOE_2 DNA_pol_B_exo2 RNase_H_2
Other DBs
NCBI-GeneID: 87952786
NCBI-ProteinID: XP_062788472
LinkDB
Position
1:join(1706180..1706446,1706558..1706683,1706758..1706853,1706937..1707249,1707322..1707626,1707682..1707887,1707944..1708054,1708112..1708292,1708341..1708526,1708576..1711695,1711760..1713271,1713354..1713443,1713523..1713649,1713729..1713793)
AA seq 2234 aa
MSSRGSFRGRGRGGSNTRFTGKKRGRGGGVAYGIDRPAPKREDDGTAAAEKFEEVKIQDE
IDEKLGFWRFESSRAEGEEKIGWLVNMHQTLIQSTSHAGGSAAVDFYFIQDDGGMFKATI
PYEPYFYVTCRAGTETIVEEWLLKRFEGVVVRIVREKKWDLDLPNHLLSAPPIFLKLFFH
NTADLQGIRRELLPLAQSNSAKFTAVDAYADMVGAENAMNGHGDDQEEKAWGAEDEGRKR
RDKEPSECIIDIREHDINYYLRVAIDLDVRVGLWYTVTSHTGIISLERITSLVKRAEPVV
MAYDIETTKQPLKFPDQQTDQIMMISYMIDGQGYLITNREIVAEDIDDFEYTPKEEYPGD
FTIFNEADEPALIRRWFEHIRESKPTVMVTYNGDSFDFPFVDVRAKIHGINMYDEIGFKP
DIEDEYKSRATMHMDCFRWVKRDSYLPQGSQGLKAVTTAKLGYNPIELDPELMTPYAIEQ
PHSLAQYSVSDAVATYYLYMKYVHPFIFSLCNIIPLNPDEVLRKGSGTLCETLLMVEAYQ
AHIIMPNRHEDPHGMTYEGHLLASETYVGGHVEALEAGVFRSDIPTHFKMEPSACEQLIG
DLDAALQFSLVEEGQIKLEDVANYDEVKAEIQTALELMRDNPNRLDKPLIYHLDVAAMYP
NIMLSNRLQPDSMKEEADCAVCDYNRPDKTCDRRLEWAWRGEYFPAKRDEVNMVRYALEQ
ELFPPKHPNAPKRRFVDLPQGDQSALIHKRLGDYSRKVYRRTHETKIVTKTSIICQRENS
FYIDTVRAFRDRRYEYKGLHKTWKKNLDKAIDEGGAVSAVDEAKKMIVLYDSLQLAHKCI
LNSFYGYVMRKGARWYSMEMAGITCLTGATIIQMARQLVEQIGRPLELDTDGIWCMLPGV
FPEDFKFKLKNGKSFGISYPCTMLNHLVHAKFTNHQYHELVDKESGKYEIRKENSIFFEL
DGPYKAMILPSSKEEDKLLKKRYAVFNPDGSLAELKGFEVKRRGELQLIKIFQSQIFDKF
LLGTTTEECYAAVAEVADQWLDILQSKASSLHDDELVDLIAENRSMSKTLAEYGTQKSTS
ISTARRLAEFLGDQMVKDKGLSCRFIISAKPNGAPVTERAIPVAIFTAEEPVKRHFLKKW
LKDNSLTEFDLRTILDWGYYTERLGSVIQKLITIPAALQKVANPVPRIRHPDWLFKRVAA
KEDKFQQHKLTDMFAKMKTNAIAKDMEDMGKSKTAGPKMALVKKKKVTREKTPEAVPDPT
EDYSEYIRVMKKEWRKQRIERSRARKQGPRQDGTVSSMLKTRSINLASRQWDIIQIASTN
RPGEFRLWLAIDGTFQSVRLRIPREFYLNFKNLPVEGTFSDRYEATTVARVLPRGQAARH
LFRLLVDETLFVEGESHFSSMINNPNVDGAYELQVPLVVRALLQFGTSCTLKTSSLGGLN
RGLDKGFDLSDLEKPGTSVLRHRYLDEGKGIRYHFIYHATFNSRHLIALFSPDSPVKTYV
VDSSRTPERLPNPARWYTEKVDVATKGIFSYPESIEFVTNYYKTELSALRQLAKDIQVIR
HGLNVVALCSPFEHSYYQVTAPVFSEFPFITFKGNDEKPSVGWLVQTSRRMVAQYLKLSS
WVKDQIEIAAHYDVPVGNLGQDAPVFLADIEFARRLKQQDMILWWSASSRPDLGGSEEDA
NLGEDLISPRMSSRGCYSSVVLEMEISDLAINAVLQSALVNEMEGSGTGSLAFDSASHNL
DEYAKGTANSSVMLGDAVLSTQTFGVLKSMVRSWFLDKARAHVKGIYSTPSDLVVDQFWR
WVSSSASNMFEPALQRFLHGLMRKTFLQLLAEFKRLGTQVVYADFNRIFLLTTKPDAGSA
FAFAKYLVTAANSQELFRHLVIDVTQFWNYLAWMDIANFGGVKVPPEIASSRDPPPAKFE
ISMDWNIQSFLPGVLQPVFERNVAQFIFQLYSAKRSSHDDRAPLRVIHNLNIDVPGENTS
TINPAKEKEKSTGQKSINQTLTRKLLNDISKIKKLQALSHVDETKAESLLFPELPGSRGD
KSNPTLELIKSITEVYSLASEHLIEIQILKRNLLDLISIREFSGDANFKNPCESIEIPMI
ICKKCNSIRDVDLCRDPDRLPTIDPQSGEILPPSRKTWVCHKCDSDYDRFQIEQPLIEMI
SKMVTSYQTQDVICMKCSSTKSDNLAATCHCGGSFKSSLSKNELKWKLKMIKSVSQYHEL
ALAGSYVEETLNRF
NT seq 6705 nt   +upstreamnt  +downstreamnt
atgtcatcaaggggctcattccgaggacgaggaaggggaggttcaaacacccggttcacg
gggaagaagagaggtagaggtggtggtgtagcatatggtatcgatagaccagcaccgaaa
agagaagatgatggtactgccgcggcagagaaatttgaagaagtgaaaatacaagatgag
atcgacgagaaattgggtttctggagattcgaaagttcacgtgcggaaggagaggaaaaa
ataggttggttggttaatatgcatcaaactctcatacagagtacatcgcatgcgggtgga
tcagcagcagtagatttctatttcatacaagatgatggaggaatgtttaaagctactata
ccttatgagccttatttctacgtgacatgtcgtgccggaacagaaaccatagtggaagaa
tggttgttgaaacgatttgaaggcgtggtggtgcgtatagtgagggaaaagaaatgggat
cttgatttgccgaatcatctactatcggcaccgcctatattccttaaattattcttccac
aacacggcggatcttcaaggcattcgaagggaacttttacctttggcacaatcgaattcg
gcgaaatttacagctgtagatgcgtatgctgatatggtaggagctgagaatgctatgaat
ggacatggtgatgatcaagaagaaaaggcttggggtgcagaagatgaaggtcgaaaacga
agagataaagaaccgtcagaatgtataatagatataagagaacatgacataaattattat
cttcgagtggcaattgatcttgatgtgcgagtcggtttatggtacactgtaacatcacat
actggtataatatcactagaaagaataacatcattagtcaagcgagctgaacctgtagta
atggcatatgacattgaaactacgaaacaaccactcaaattcccagatcagcaaacggat
cagattatgatgatatcatatatgattgatggccaagggtatctgataacgaatagggag
atcgtagcagaggatatcgatgatttcgaatacacaccgaaagaagaatatccaggagat
ttcaccattttcaacgaagctgacgagcctgcattgatacggcgctggttcgaacatata
agagaatcaaaacccacagtcatggtcacctacaatggagatagtttcgatttcccattc
gtagatgttagagcaaaaattcatggaataaatatgtatgatgagataggattcaagccg
gatatagaggatgaatataaatcaagagctacaatgcacatggactgttttagatgggtg
aaacgagattcttatctaccacaaggaagtcaaggtctcaaagctgtcactactgctaaa
ttaggatacaaccctattgaattagatcctgagctcatgacgccatacgctatcgagcaa
ccacacagtcttgcacagtattcggtctccgatgcggttgccacatattacctatacatg
aaatacgtccatcccttcatcttctcgctgtgtaacatcatccccctaaatccagatgaa
gtactgaggaaaggtagtggaactttgtgtgaaacacttttgatggtcgaagcgtatcaa
gcgcatatcatcatgccaaatcggcatgaagatccacatggaatgacatatgagggtcat
ttgctggcttcagagacatatgtcggtggtcatgtagaagcgttggaagctggagtgttc
aggagtgatataccgacacacttcaagatggaacccagtgcatgtgaacaactcattgga
gaccttgatgccgcattgcaattctccttggtcgaagaaggtcaaatcaagcttgaagac
gtcgcaaattatgatgaggtcaaagccgaaattcaaacagcacttgagcttatgcgagat
aacccaaaccgtctagataaacccctcatttaccatttagacgtcgcagcaatgtatccc
aatatcatgttgtcaaatcgtctacaacctgactcaatgaaagaagaagcggattgtgca
gtttgcgattacaatcgaccggacaagacatgtgatagaaggctagaatgggcgtggaga
ggggagtatttcccagcgaagagggatgaagtcaacatggttcgatacgctttggagcaa
gagttgtttcctccgaaacatcctaacgcacccaaaaggcgatttgtggatctacctcaa
ggagaccaatcagcactgatacataaacgtcttggtgattattcgcgaaaagtatacagg
agaactcacgaaaccaaaattgtcaccaagacttccatcatctgtcaacgagaaaattct
ttttatatcgacactgtgcgagctttccgagatcgaagatacgaatataaaggtctccac
aaaacatggaagaaaaatcttgataaagccattgacgaaggaggtgctgtgagcgccgtg
gatgaagctaaaaagatgattgttttatacgactccctgcaattagctcacaagtgtatc
ttgaactcgttctatggatacgtcatgagaaaaggagcaagatggtactccatggaaatg
gctggtatcacctgtctaacaggagctacgatcattcagatggctcgacaattggttgaa
caaattggaagaccgttggaattggatacggatggtatttggtgtatgcttccaggggtt
ttccccgaagatttcaagttcaaactcaagaatgggaaaagcttcggtatatcatatcct
tgtaccatgttaaatcatctcgttcatgccaaattcactaatcatcaataccacgaactg
gtcgacaaagaatctggcaagtatgaaattagaaaggagaacagtattttcttcgaatta
gacggtccttacaaagcgatgattttaccctcatcaaaggaagaagacaaattactgaag
aaacgatatgcggtattcaacccggatggatctttagcagaattgaaggggttcgaagtc
aaaagacgaggtgaacttcagttaatcaagatcttccaatctcaaatattcgacaaattc
ttgcttggtaccactacagaagaatgttatgctgccgtagcagaagttgctgatcaatgg
cttgatatcttgcaaagtaaagcctcctctttgcatgacgatgaactggtcgatcttatc
gctgagaatagaagtatgtccaagacactagcggaatacggaacacaaaagtctacctct
attagtaccgctcgaagactggctgaattcttgggtgatcaaatggtaaaagacaaaggt
ttatcatgtcgatttatcatttccgccaaacccaatggtgctccagtaacagaacgagct
atcccggtagccattttcaccgccgaggaacctgtcaaacggcatttcctgaaaaaatgg
ttgaaggacaacagtcttactgaatttgacctgcgaacgatcctcgattggggctattac
acggaacgattaggctctgtcatccaaaaattgattactatccccgctgctttacaaaag
gtagccaatccagtaccgagaatcagacaccccgattggcttttcaaaagagtagctgct
aaagaagataagttccaacagcacaaactcacagatatgttcgccaagatgaaaacaaac
gcaattgcaaaagatatggaagatatgggtaaatcaaagaccgccggtccgaaaatggct
ctagtgaaaaagaagaaggttacaagggaaaagacacctgaagctgttcccgatcctacc
gaggactattctgagtatatccgagtgatgaagaaagaatggcgaaaacaacgaatcgaa
cgttctcgagcgaggaaacaaggtccaagacaagatggtactgtttcgtcgatgttgaag
acgagatctatcaaccttgcttcaagacaatgggatatcattcaaatagcttcaacgaat
cgacctggagagtttagattgtggttggctattgatgggactttccaatctgttcgactg
agaattcctagggagttttacctgaatttcaagaatttacccgttgaaggcactttctca
gatcggtatgaagcaactaccgtagccagagtattacccaggggccaggcagcaagacat
cttttcagattgttagtggacgaaaccttatttgtagaaggcgaatcgcacttttcaagt
atgatcaacaatccaaatgtcgacggagcatatgaacttcaggtaccactggttgttcga
gcattacttcaatttggcacaagctgtaccctcaaaacatcttctttgggtggactgaat
agaggtttggataaaggttttgatttatccgatctcgagaaaccgggcacaagcgtttta
agacatagataccttgatgaaggtaaaggaattcgataccatttcatctatcatgccact
ttcaattcgagacatctcatcgcccttttctcacccgatagtccagtgaagacatatgtc
gtggacagttctaggacacccgaaagattacccaaccctgcaagatggtataccgaaaag
gtcgatgtagctaccaaaggtatattttcatatcctgagtcaatcgaatttgttacgaac
tactacaaaacggaattatcagctttgagacaactagcaaaagatatccaagttatcaga
catggtctgaatgttgttgctctttgttcaccctttgaacattcttactaccaagtcacc
gctcccgtcttctccgaattccccttcatcactttcaaaggtaatgacgagaaaccaagt
gtgggttggctagtccaaactagtagaagaatggtagcgcaatatcttaagttatcgagc
tgggtcaaagatcagattgagatcgctgctcattacgatgtgccagttggcaatctgggc
caagatgcacctgttttcctagctgatatcgaatttgcccgacgtctcaaacaacaagat
atgatcctatggtggtcagcttcttcccgaccggacctgggcggttcagaagaggatgcc
aacctcggcgaagatcttatctcaccccgcatgtcgagcagaggatgttattcttcagtc
gtcctggaaatggaaatctcggatctagccatcaatgcggtcctccagtctgctctagtc
aacgagatggaaggctcaggtacaggttctctggcatttgactctgcatcacacaacctt
gatgaatacgctaaaggaacggcaaactcatcggttatgcttggtgatgctgtgttgtca
actcagacttttggtgtgctcaagtcaatggtccgatcatggttcctcgataaagcacgt
gcacacgtcaaggggatttactcaacaccatctgatcttgtggtcgatcagttctggaga
tgggtcagttcttcagcaagtaatatgtttgaacccgcgctacaacgatttcttcacggt
ctgatgcggaagactttcttgcaattattagcggaattcaaaaggttagggactcaggtg
gtctatgcggatttcaatcgaatcttcctgttgacaactaaaccagacgctggaagcgcc
tttgctttcgcgaaataccttgtaacagctgccaactcccaagaattgttcagacactta
gtcatcgacgttactcaattctggaactatttagcttggatggatatagctaatttcggt
ggtgtgaaagtcccacctgagattgcatcttcgagagatccgccaccagcgaaattcgag
attagtatggattggaatatacaatctttcttacctggtgtacttcaacctgttttcgaa
aggaatgtagctcaattcattttccaattatacagcgctaaaagatcatcacatgatgat
cgagctccattacgagttatacataacctaaacatcgatgtaccaggagaaaacacatcc
actataaaccctgctaaagaaaaggagaaatccactggacagaaatcgatcaatcaaaca
ctcacacggaaattattgaatgatatatccaaaatcaagaaattacaagctttatcacac
gttgatgaaaccaaagctgagagcttattgttccccgaattacctggatccagaggagat
aaatcgaatccaactttagaattaatcaaatcaatcacagaagtatattcgttagcttct
gaacatttaattgaaattcaaatcctcaaaagaaatttattagacttgatttcaataaga
gaattttccggagacgcgaatttcaaaaacccctgtgaaagtatagaaataccgatgatc
atttgcaagaaatgtaactcaatcagagatgttgatctctgtagagatccagatagatta
cctactatagatcctcaatcaggtgaaatattacctccttcaaggaaaacatgggtttgt
cataaatgcgattcagactatgatagattccaaattgaacaaccattaatagagatgatt
tccaaaatggtaacttcatatcaaacacaagatgtgatttgcatgaaatgctcttctacg
aaatcagataatttggctgcgacatgccattgtggaggatcattcaaatcttctttaagt
aagaatgaactgaagtggaagttgaaaatgattaaaagtgtttcacaatatcatgaactt
gctttggccggaagttacgtcgaagaaacgttgaacagattttag

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