KEGG   Kwoniella shivajii: 87953616
Entry
87953616          CDS       T10982                                 
Symbol
IL334_001485
Name
(RefSeq) transitional endoplasmic reticulum ATPase
  KO
K13525  transitional endoplasmic reticulum ATPase
Organism
ksh  Kwoniella shivajii
Pathway
ksh04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:ksh00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    87953616 (IL334_001485)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ksh03019]
    87953616 (IL334_001485)
   03009 Ribosome biogenesis [BR:ksh03009]
    87953616 (IL334_001485)
   04131 Membrane trafficking [BR:ksh04131]
    87953616 (IL334_001485)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ksh04147]
    87953616 (IL334_001485)
Messenger RNA biogenesis [BR:ksh03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     87953616 (IL334_001485)
Ribosome biogenesis [BR:ksh03009]
 Eukaryotic type
  Pre-60S particles
   Ribosome quality control proteins
    87953616 (IL334_001485)
Membrane trafficking [BR:ksh04131]
 SNARE
  SNARE associated proteins
   Others
    87953616 (IL334_001485)
 Autophagy
  Aggrephagy
   Other aggrephagy associated proteins
    87953616 (IL334_001485)
Exosome [BR:ksh04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   87953616 (IL334_001485)
SSDB
Motif
Pfam: AAA AAA_lid_3 CDC48_N RuvB_N AAA_33 AAA_2 AAA_16 AAA_5 CDC48_2 TIP49 AAA_22 AAA_14 Mg_chelatase RNA_helicase Vps4_C AAA_28 Parvo_NS1 nSTAND3 AAA_7 AAA_17 IstB_IS21 ATPase NPHP3_N AAA_18 DUF815 ABC_tran Sigma54_activat AAA_24 ResIII PhoH TsaE SLFN-g3_helicase Molydop_binding NB-ARC KAP_NTPase
Other DBs
NCBI-GeneID: 87953616
NCBI-ProteinID: XP_062789293
LinkDB
Position
2:complement(join(298092..298151,298200..298304,298356..298371,298429..298733,298785..298837,298897..298920,298974..299004,299058..299283,299343..300286,300340..300444,300502..300519,300576..300652,300706..300777,300842..300955,301022..301105,301158..301174,301245..301337,301409..301458,301555..301575))
AA seq 804 aa
MADDPSRPVNDDSTATAILRQKRSPNRLMVDESPQEDNSVAILHPNTMEALGLFRGDTII
VRGKRRRDTVLICLSQDDIEEGKIAMNKVARGNCAVKLADLVHVSPANDIKYGKRIHVLP
FADSIEGLSGNLFDVYLRPYFLEAYRPVRKGDVFQVRGGMRTVDFKVVEVDPSPYCIVAS
DTVIHTEGDPIDREAEEADLNAVGYDDLGGCRKQLAQIRELVELPLRHPQLFKAIGIKPP
RGILMFGPPGTGKTLMARAVANETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSP
SIIFIDEIDSIAPKRDKAQGEVERRVVSQLLTLMDGLKARSNVVVMAATNRPNSIDPALR
RFGRFDREVDIGIPDPTGRLEILRIHTKNMKLADDVDLEQIAADTHGYVGADMASLCSEA
AMQQIREKMDLIDLDEETIDAEVLDSLGVTMENFRFALGTNNPSALRETVVEIPTTTWDD
IGGLDKVKRELQETVQYPVEHPEKFLKYGMSPSKGVLFYGPPGTGKTLLAKAIANECQAN
FISIKGPELLTMWFGESEANVRDVFDKARAAAPCVMFFDELDSIAKSRGGSGGDGGGASD
RVLNQILTEMDGMNAKKNVFIIGATNRPDQIDSALLRPGRLDQLIYIPLPDETSRLSILK
ATLRKSPIDPAVDLNFLAKSTAGFSGADLTEICQRAAKLAIRASIEADIRKERERKDKAE
AEGETADVDLMDADNEEDEVPSITVDHFEEAMRYARRSVSDADIRRYEMFSTTLQQSRSF
GNTFKGGQAQEGGASFQNEADDDE
NT seq 2415 nt   +upstreamnt  +downstreamnt
atggctgatgatccttccagacccgtcaatgatgactctactgctactgccatccttagg
cagaagcgatcacccaataggttgatggttgatgaaagtcctcaggaggacaatagtgtc
gctattctccatcctaacacaatggaagctctcggtcttttccgtggagataccatcatc
gttcgtggaaagcgaaggagagataccgttcttatctgcttaagtcaggatgacatagaa
gagggcaagattgccatgaacaaggttgcccgtggaaattgtgctgtcaagcttgccgat
ctcgtccacgtatctcctgccaacgatatcaaatacggcaagcgtatccacgttctgccg
ttcgctgattccatagagggactctccggaaacctgttcgatgtataccttcgtccctac
ttcctggaagcctatcgcccggtccgaaaaggcgatgtattccaagttcgaggtggtatg
agaactgtagatttcaaggtcgttgaggttgatccttcgccttactgtattgttgcatca
gacacagtcatccacactgaaggtgaccctatcgatcgagaagcagaggaagccgatttg
aatgctgtcggatacgatgatctcggtggctgcaggaaacaactcgctcagatccgagaa
ttggttgagcttcctttacgacaccctcaactgttcaaggctattggtatcaaaccacct
cgtggtattctaatgtttggtcctcctggtactggtaaaactctcatggctcgtgccgtt
gccaatgagactggtgcattctttttcctcattaatggtccggaaatcatgtctaaaatg
gctggagaatcagaatcaaatctccgaaaggctttcgaggaggcagaaaagaacagtcca
tccatcatcttcattgatgagatcgattccatcgctcccaagcgagacaaagctcaaggt
gaagttgagcgacgggtagtatctcaacttcttactctcatggatggtcttaaagcacga
tccaacgtagtggtcatggctgctaccaaccgaccgaattcaattgatcccgctctccga
cgatttggtcgatttgatagagaagttgacatcggtattcctgatcctaccggtcgactt
gagatccttcggatccacaccaagaacatgaaactcgcagatgatgttgatcttgaacag
atcgcggctgacactcacggttatgttggtgcggacatggcatctctgtgttccgaagcg
gctatgcaacagatcagggagaaaatggatctcatcgatctcgatgaagaaactattgat
gctgaagtcctcgactcacttggcgttactatggagaacttccgatttgcccttggtacc
aataacccctctgctctccgagagactgtcgtcgaaattcctactactacatgggacgac
atcggtggtttggacaaggttaaacgggagttgcaagaaactgtacaataccctgtcgag
catcctgagaaattcctcaagtatggtatgtctccttctaagggtgtgctgttctatgga
cctcctggtaccggtaagacattgctagcaaaggctatcgccaacgaatgtcaagccaac
tttatctccatcaaaggtccagagctcttgacgatgtggttcggagagtcagaagccaat
gttcgagatgttttcgacaaagctcgtgcggctgccccttgtgtcatgttctttgacgaa
ttggactctattgccaagtccagaggtggttctggcggtgatggcggtggcgctagcgat
cgagtccttaatcagattctgactgaaatggacggtatgaacgctaagaagaacgtcttc
atcatcggagcaaccaatcgacccgatcaaattgattccgctcttctgcgaccaggtcgt
cttgatcaacttatctatataccccttcctgacgagacctctcgattgtctattctcaaa
gctactttgcgtaaatctcccatcgaccccgctgttgacctcaatttcctcgctaaaagc
actgccggcttctccggtgccgaccttaccgagatctgtcagcgtgctgccaaacttgcc
atccgagctagtatcgaggccgatatccggaaagagagagagcgtaaggacaaggccgag
gctgagggcgagactgcagatgtggatttaatggatgcagacaatgaagaagatgaagtt
ccctccatcacagttgaccacttcgaagaggcaatgcgatacgctcgacgatccgtctcc
gacgcggatattcgtcgttacgaaatgttcagtactactctccagcagtccagaagtttc
ggtaacacctttaagggtggacaagcgcaagaaggcggagctagtttccagaacgaggct
gatgatgacgagtaa

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