KEGG   Kwoniella shivajii: 87954056
Entry
87954056          CDS       T10982                                 
Symbol
IL334_001925
Name
(RefSeq) flap endonuclease 1
  KO
K04799  flap endonuclease-1 [EC:3.1.-.-]
Organism
ksh  Kwoniella shivajii
Pathway
ksh03030  DNA replication
ksh03410  Base excision repair
ksh03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:ksh00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    87954056 (IL334_001925)
   03410 Base excision repair
    87954056 (IL334_001925)
   03450 Non-homologous end-joining
    87954056 (IL334_001925)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ksh03032]
    87954056 (IL334_001925)
   03400 DNA repair and recombination proteins [BR:ksh03400]
    87954056 (IL334_001925)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ksh04147]
    87954056 (IL334_001925)
DNA replication proteins [BR:ksh03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    87954056 (IL334_001925)
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     87954056 (IL334_001925)
DNA repair and recombination proteins [BR:ksh03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     87954056 (IL334_001925)
Exosome [BR:ksh04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   87954056 (IL334_001925)
SSDB
Motif
Pfam: XPG_N XPG_I 5_3_exonuc
Other DBs
NCBI-GeneID: 87954056
NCBI-ProteinID: XP_062789724
LinkDB
Position
2:join(1505406..1505418,1505493..1505554,1505635..1505669,1505875..1505952,1506038..1506140,1506213..1506276,1506331..1506440,1506493..1506543,1506604..1506756,1506812..1507216,1507388..1507452,1507535..1507736)
AA seq 446 aa
MGIKGLTALLSEHAPRCMKDHEMKTLFGRKVAIDASMSIYQFLIAVRQQDGQMLMNESGD
VTSHLMGFFYRTIRMVDHGIKPCYIFDGKPPELKGTVLAKRFARREEAKEGEEEARETGT
AEDIDKLARRQVRVTKEHNEECKKLLALMGIPVVTAPGEAEAQCAELARAGKVYAAGSED
MDTLTFHSPILLRHLTFSEAKKMPISEINLDVALQDLDMSMDRFIELCILLGCDYLEPCK
GIGPKTALKLIREHGGLKGVVDFVRGKMEEKERENQVIASSQNYDDDSDRESEEGGGGMM
VNSDGEEVPLQSSPVKKSPAKKKKKVTSSGMVIPEHWPWEEAKQLFITPDVVKGDNLDLD
WKAPDTDGLVEFLCRDKGFNEDRVRAGAAKLTKMLAAKQQGRLDGFFTVKPKDSSTTKPS
SGKPTAGGKRKGDDKDKGGAKKKGKK
NT seq 1341 nt   +upstreamnt  +downstreamnt
atgggtatcaaagggttaacagctcttttgagcgaacatgctccgagatgtatgaaagat
cacgagatgaagactctattcggtagaaaagtagccattgacgcttctatgtcgatctac
cagttcctaatcgctgtaagacaacaagatggtcagatgttaatgaatgaaagtggtgat
gtgacgagtcatctgatgggtttcttctatcgaacaatacgaatggtagatcacggtata
aaaccgtgttacatattcgatggtaaaccacccgaattgaaaggtactgtcctcgcgaaa
cgatttgcaagaagagaagaagccaaagaaggtgaagaagaagctcgagaaacaggtact
gctgaggatattgataaactcgctagaagacaagttcgggtgacgaaagagcacaatgaa
gaatgtaagaagttgttagcgttaatgggtattccagtggtgactgcaccaggagaggct
gaagctcaatgtgccgaacttgcgagggcaggaaaggtatatgcggcaggatccgaggat
atggatactttgacattccactcgccgatacttcttcgacatctcactttctcagaagcg
aagaagatgcctatttcagagataaatctggacgtagctttacaagatctggatatgagt
atggaccgcttcatcgaactctgtattttacttggatgtgattaccttgaaccgtgcaaa
ggaattggacccaaaaccgccttaaaactcataagagaacacggtgggctgaaaggggtt
gttgatttcgttcgaggcaaaatggaagagaaagaaagggaaaaccaagtcatagcttca
tctcaaaattacgatgatgattcagatagagaaagtgaagaaggtgggggcggaatgatg
gttaattccgatggggaagaagtacctttacaaagtagcccggtaaagaaaagcccagcg
aagaagaagaagaaggttaccagttcgggtatggttatacctgaacactggccatgggaa
gaagcgaaacaactgttcatcacgccggatgtcgttaaaggtgataatctagatctcgat
tggaaagcacctgatactgatggattagtagaatttttgtgtcgagataaagggttcaat
gaggacagagttagagcgggagcagccaaactaaccaagatgttagcggctaaacaacaa
ggtagactggatggtttcttcacggtgaagccgaaagattcaagcacgactaaaccatct
tcaggaaagcccactgctggtggaaagaggaaaggtgatgataaagataaaggtggggcc
aagaagaagggaaagaagtag

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