Kwoniella shivajii: 87954397
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Entry
87954397 CDS
T10982
Symbol
IL334_002266
Name
(RefSeq) TATA-box-binding protein
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
ksh Kwoniella shivajii
Pathway
ksh03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ksh00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
87954397 (IL334_002266)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ksh03000
]
87954397 (IL334_002266)
03021 Transcription machinery [BR:
ksh03021
]
87954397 (IL334_002266)
Transcription factors [BR:
ksh03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
87954397 (IL334_002266)
Transcription machinery [BR:
ksh03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
87954397 (IL334_002266)
RNA polymerase III system
TFIIIB
87954397 (IL334_002266)
RNA polymerase I system
SL1/TIF-1B
87954397 (IL334_002266)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TBP
DUF4295
Motif
Other DBs
NCBI-GeneID:
87954397
NCBI-ProteinID:
XP_062790063
LinkDB
All DBs
Position
3:complement(join(103209..103228,103311..103452,103663..103935,104162..104249,104510..104718))
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AA seq
243 aa
AA seq
DB search
MSGLALPTSTASSSKAGPSTTNTTTNGTSEILRDDERLEGEGDIMKRPPNKVISSVPEIT
AVQGLVPTLQNIVATVNLECRLDLKTIALHARNAEYNPKRFAAVVMRIRDPKTTALIFAS
GKMVVTGAKSEDDSRLASRKYARIIQKLGFDAKFAEFKIQNIVGSCDVKFPIRLEGLAFS
HGAFSSYEPELFPGLIYRMMKPKVVLLIFVSGKIVLTGAKVREEIYMAFNQIYSVLVEFR
KEA
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggactcgctttacctacttctactgcatcatcatctaaagccggaccgtcgact
accaatactactactaatggcacgtcagagattttaagagatgatgagagattggaaggt
gaaggtgatattatgaaaagaccacctaataaagtgatcagcagtgttccggagataacg
gctgtccaaggcttggtacccacactacaaaatatcgtagcgactgtgaatctcgaatgt
agattagatttaaaaacaatcgctttacatgctcgaaatgcggaatataatccaaagcgt
ttcgcagcggtggtaatgcgtatccgggatccaaaaacaacagcattgatattcgcatct
gggaaaatggtagtcacaggagccaaatcagaagatgattcaagactcgcttcgaggaaa
tacgcaaggatcatacaaaaattaggattcgacgctaaattcgctgagttcaaaattcaa
aatatcgtcggaagttgtgatgtgaaatttccaattaggctggaaggtctggcttttagt
catggtgctttctcgagttatgagcctgagctcttcccgggtcttatctaccgaatgatg
aaacccaaagttgtcttactcatcttcgtatctggtaaaatcgtcttgacgggtgcaaaa
gtaagagaagagatttacatggcatttaatcaaatctattcggtcttggtcgaattccga
aaagaagcatag
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