Kwoniella shivajii: 87954688
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Entry
87954688 CDS
T10982
Symbol
IL334_002557
Name
(RefSeq) tRNA pseudouridine(55) synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ksh Kwoniella shivajii
Brite
KEGG Orthology (KO) [BR:
ksh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ksh03016
]
87954688 (IL334_002557)
Enzymes [BR:
ksh01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
87954688 (IL334_002557)
Transfer RNA biogenesis [BR:
ksh03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
87954688 (IL334_002557)
Prokaryotic type
87954688 (IL334_002557)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-GeneID:
87954688
NCBI-ProteinID:
XP_062790352
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All DBs
Position
3:complement(join(953328..954237,954339..954493,954570..954625,954685..954857,954920..954996))
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AA seq
456 aa
AA seq
DB search
MPKALTTPTLPLNGLFPIAKPSGPSSMKVIDAITPLLLESKLFDDPERRRHAKGQSKRKK
NTTHMGLKIGQGGTLDPLADGVLVIGVNRGTKHLNKYLECTKQYESIGLLGCMTTSMDSE
DPVLSTAAWEHVTREDIEKVLDRFRGEIDQVPPIFSALKMDGKHLYEYARESKPLPRPIP
TRKCTVSIELIDFRPASINPGDGGHEYRWPDKRLSEEEKKVFRKLTDIVSAAGTEPGKPK
GQHEPSTTAAPSTAPSTTTTKTEEEEATDGKSEVKTESFVPDLEKPDYPEVSPINGLRPP
TFKVRMTVSSGTYVRSIVHDVGVALGCGAHVVELTRTRQGEFSLYGDEQALSEITTAEED
KLEGVEEVTGPTGGSIPWSVWERALAEREKSIATEKQEREEAMMSGASAEEMHTNWSQEA
IRQRRHQGEHKEWETEVLRRFVTVPVPLSGGHGWRE
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaagcactcacaacacctacattacctcttaacgggttattcccaattgccaag
ccttcaggtccaagctcgatgaaagtgattgatgctatcactccgttattgcttgaatca
aagcttttcgatgatccagaaagaagaagacatgcaaaaggccaatctaagagaaagaag
aatacaactcatatgggtctgaaaatcggtcaaggtggtacattagatcctctagctgat
ggtgtactggtgatcggtgtgaatagaggtacgaaacatcttaacaagtacctggaatgt
acaaagcaatacgagagtatcggacttttaggatgtatgaccacttctatggattcagag
gatcctgtattatctaccgcagcatgggaacatgtcactcgtgaagatatagagaaagtg
ctagatagatttcgaggagaaatagatcaagtacctccaatcttttcagctttgaaaatg
gatggtaaacatttatatgaatatgcgagagaatcaaaaccgttacctagaccaatccca
acacgtaaatgcacagtctcaattgaacttatagattttagaccagcttcaataaatcca
ggagatggaggacatgaatatcgatggcctgataaacgattatcagaagaagagaaaaag
gtattcaggaaattgaccgatatcgtatctgccgctggaactgaacctggtaaaccaaaa
ggtcagcatgaaccatcaacaacagcagcaccatcgacagcgccatcgacaacgacgacg
aaaacggaagaagaagaggctacagatggaaaatcagaagtcaagactgaatcgttcgtg
ccggatttagaaaagcctgattatccagaagtttctcctataaatggattaagaccaccg
acgttcaaagtcagaatgacagtctcaagtggaacttatgttagatcaatcgtacatgat
gttggagtagctttaggatgtggtgcacatgtagtggaacttactcgaacaagacaaggt
gaattttcgttgtatggtgacgagcaagctctttcggaaatcactacagcagaggaagat
aagctagaaggagtagaagaagttactggacctacgggcggatcaataccttggtcagta
tgggagagggctctggctgaaagagagaagagtatagctacagagaaacaagaaagagaa
gaagcgatgatgtcaggggctagtgcagaagaaatgcatacgaattggtcacaagaggct
atcagacaaagaagacatcaaggggaacataaagagtgggagactgaagtgctgagaaga
tttgtaacggttcccgtacctctgagtggtggacatggatggagggagtag
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integrated database retrieval system
