Kwoniella shivajii: 87954771
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Entry
87954771 CDS
T10982
Symbol
IL334_002640
Name
(RefSeq) uncharacterized protein
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
ksh Kwoniella shivajii
Brite
KEGG Orthology (KO) [BR:
ksh00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ksh01009
]
87954771 (IL334_002640)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ksh03019
]
87954771 (IL334_002640)
04131 Membrane trafficking [BR:
ksh04131
]
87954771 (IL334_002640)
03036 Chromosome and associated proteins [BR:
ksh03036
]
87954771 (IL334_002640)
Enzymes [BR:
ksh01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
87954771 (IL334_002640)
Protein phosphatases and associated proteins [BR:
ksh01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
87954771 (IL334_002640)
Messenger RNA biogenesis [BR:
ksh03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
87954771 (IL334_002640)
Membrane trafficking [BR:
ksh04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
87954771 (IL334_002640)
Chromosome and associated proteins [BR:
ksh03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
87954771 (IL334_002640)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
Arb2-like
Arb2
DUF1749
Ser_hydrolase
Motif
Other DBs
NCBI-GeneID:
87954771
NCBI-ProteinID:
XP_062790435
LinkDB
All DBs
Position
3:join(1196092..1196704,1196806..1197094,1197151..1197303,1197369..1197481,1197534..1197661,1197732..1197921,1197975..1198188,1198259..1198325,1198379..1198477,1198528..1198607,1198665..1198845,1198895..1198982,1199047..1199216)
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AA seq
794 aa
AA seq
DB search
MEVDGSPSQRQSNAPVTLTESSTTQQPETLDQSMDIDSAPEAGPSKQPQMIIQQTTTIEE
TTVITNDLPQTIAPSELTNGIIHTPSRPLNGHLPTSASGPSDLFSISTPNFNVVERPRIY
RTGYIYDPMMMLHCQEGYVPTAESVVDNGPGHPEEPMRIKRIFSRLAEQGLIKRMKRIDF
GQVSMEQVLLVHGEDLWLKVQGTENLTDEYIQDSKLYYEQLSLYVCRETAHCARLSCGGV
IQACISVCEREVRNAFAIVRPPGHHAEPDEHMGFCFFNNVAVAAREVQRRDLAKKVLILD
WDVHHGNGTQRAFWDDPNVLYVSLHRHDGGRFYPTSDFGALDMVGSGAGEGTSVNIPWPG
PGFGDADYIYAFQRIVMPIAYEFAPDLVIISAGFDAADGDQLGGCHVTPAAYGHMTHMLC
ALAGGKLVVALEGGYNLKAISDSALAVAQVLLGETPAELEAHQASEVATEVIYQCAKVQS
KYWKSIDVKACEPPEVNALEDGSSPITSIPDLLKIYRAHHMYEKHQLYQIPLASSELETA
FAGQVMCSENVYDMGPEGVLVIFVHDFGNLRVETDGVSTTNVHMANSYLIDTSDAIINWV
KKEGYNIIDVNILKQLPTAFASEGPKMVSKAGPQMESQLIRYIWDNYIELSEADNVVLIG
HGTGCQTIMDLVNCREVEKKVKAVVQVAGLHSLVRVDPTNENRRIWFRKSNQVYVPSTHP
VLEEERIQKRLGGQVFTSERAKVVDVLNDVLPRIKEFVSSKVPETLPAVNGHANGHAHLN
GAGEEASIAHPITA
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atggaggttgatgggtctccttctcaacgacagtccaatgcacctgtgactctcaccgag
tcttccacaacgcaacagccagaaaccctagatcaatctatggatattgattcagcaccc
gaagctggcccttccaaacagcctcagatgatcatacaacaaacgacgacaattgaagag
acaaccgtcattacaaatgatcttcctcaaactatcgctccatcggaactcaccaatggg
attattcatactccctctcgaccccttaatggtcatcttccaacttccgcaagcggacct
tccgaccttttctctatctcaaccccgaatttcaatgtcgtcgaaagaccccgaatctat
agaacagggtatatatacgatccaatgatgatgttacattgccaagaaggatacgtaccc
acagcagaaagcgtagttgataatggacctggacatccagaagaaccaatgaggataaaa
agaatcttctcaagacttgcagaacaaggtttgataaaaagaatgaaaagaatagatttc
ggtcaagtttcaatggaacaggttctattagtccacggtgaagatttatggttgaaagtt
caaggtacagaaaatcttaccgacgagtatatacaagattcgaaactctattatgaacaa
ttatcactctacgtatgtagagagactgctcattgtgcgagattatcatgtggtggtgtc
atccaagcctgtatctcagtctgtgagagagaagtcaggaatgcttttgctatagtcaga
ccaccaggacatcatgcggaacctgatgaacatatgggtttctgtttctttaacaatgta
gctgttgccgcaagggaagtacaaaggagagatctagcgaagaaggttttgattttggat
tgggatgtccaccatggaaacggaacacaaagagctttctgggatgatccgaatgttcta
tacgtctcattgcatagacatgacggaggtcgattctaccccactagtgattttggcgca
ttagatatggttggatcaggtgcaggagaaggaacgtcggtaaacattccatggcctgga
cctggattcggagatgcggattacatatatgctttccaacgtatagttatgcctatagct
tacgaatttgcaccggatctcgtcatcatttctgctggatttgacgctgccgatggagat
cagttgggaggatgccatgtcaccccagcagcatacggtcatatgacacatatgctttgt
gctttagcaggaggaaagctagtggttgcattagagggaggatacaatctcaaagctatc
tctgattctgctcttgctgttgcgcaagtccttctgggtgaaacaccagctgaactcgaa
gcacaccaagcctcagaagtggcgactgaggtgatctaccagtgtgctaaagtgcaatca
aagtactggaagagtatagacgtcaaggcttgcgaaccaccagaagtgaatgctcttgaa
gatggatcatcacctatcaccagcatcccggatcttcttaagatataccgagctcaccac
atgtatgagaaacatcaactgtatcaaatacccttggctagctccgaactcgaaactgct
tttgcaggacaggtaatgtgcagtgagaacgtctacgacatgggaccggaaggagtattg
gtgatatttgtgcatgactttgggaatcttagagtggaaacggatggtgtttcgaccaca
aacgtgcacatggcaaacagttatctgattgatacgagcgatgctatcattaactgggtg
aagaaagagggctataatataatcgatgtaaacatcctaaagcagttgccgacagcattt
gcatctgagggtccgaagatggtttcgaaagctggtcctcagatggaaagccagttgatc
cgatatatctgggataactatatcgagttgtcagaggcagataatgtcgttctcatagga
catggaacaggttgccaaaccatcatggatttggtcaactgcagagaagtggagaagaag
gttaaagctgttgtacaagttgccggactacattccctagtcagagtggatcctacaaat
gaaaatagacgtatatggttcagaaagtctaaccaggtgtacgtaccttcgacacatcca
gtcttggaagaagaaaggattcaaaagagactgggaggacaagttttcacttctgaaaga
gcaaaagtagtagatgtactgaatgacgtcttacctcgtatcaaggagttcgtctcctcc
aaagtgcccgagacgctccccgcagtgaatggacacgcgaatgggcatgctcatctaaat
ggagcaggggaggaagcatccatcgctcatcccataactgcctag
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