Kwoniella shivajii: 87954792
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Entry
87954792 CDS
T10982
Symbol
IL334_002661
Name
(RefSeq) ATP-dependent RNA helicase FAL1
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
ksh Kwoniella shivajii
Pathway
ksh03013
Nucleocytoplasmic transport
ksh03015
mRNA surveillance pathway
ksh03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ksh00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
87954792 (IL334_002661)
09122 Translation
03013 Nucleocytoplasmic transport
87954792 (IL334_002661)
03015 mRNA surveillance pathway
87954792 (IL334_002661)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ksh03019
]
87954792 (IL334_002661)
03041 Spliceosome [BR:
ksh03041
]
87954792 (IL334_002661)
03009 Ribosome biogenesis [BR:
ksh03009
]
87954792 (IL334_002661)
03012 Translation factors [BR:
ksh03012
]
87954792 (IL334_002661)
Enzymes [BR:
ksh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
87954792 (IL334_002661)
Messenger RNA biogenesis [BR:
ksh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
87954792 (IL334_002661)
mRNA cycle factors
Stress granule specific factors
87954792 (IL334_002661)
Spliceosome [BR:
ksh03041
]
Complex C
Other components
EJC/TREX
87954792 (IL334_002661)
Ribosome biogenesis [BR:
ksh03009
]
Eukaryotic type
90S particles
Helicases
87954792 (IL334_002661)
Translation factors [BR:
ksh03012
]
Eukaryotic type
Initiation factors
eIF-4
87954792 (IL334_002661)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_30
Gp6_2nd
UvrD-helicase
AAA_22
Motif
Other DBs
NCBI-GeneID:
87954792
NCBI-ProteinID:
XP_062790453
UniProt:
A0ABZ1CVZ7
LinkDB
All DBs
Position
3:join(1256977..1256993,1257068..1257113,1257230..1257239,1257313..1257740,1257926..1258200,1258253..1258414,1258471..1258723)
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AA seq
396 aa
AA seq
DB search
MAGINTGDEKLVFESSEAVSVAPTFEALNLKEDLLRGIYAYNFEKPSAIQQRAIIPIMRG
RDVIAQAQSGTGKTATFSISALQSIDTKVRESQVLVLSPTRELAVQIQSVMLALGDYMNV
SCHACIGGTSVGEDIRKLEAGQQVVSGTPGRVFDMIRRRNLRTKDIKMLILDESDELLNK
GFKDQIYDIYRYLPPATQVVVVSATLPHDVLEMTTKFMTDPIRILVKRDELTLEGIKQFF
VAVEKEDWKFDTLCDLYDTLTITQAVIFCNTRRKVDWLTEKMREANFTVSSMHGEMVQKE
RDAIMAEFRGGQSRVLITTDVWARGIDVQQVSLVINYDLPTSRENYLHRIGRSGRFGRKG
VAINFVTVEDVRILRDIEQYYSTQIDEMPMNVTELT
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atggcaggaatcaacaccggtgatgaaaaactcgtattcgagtcttccgaggcagtctcg
gtggctcccactttcgaggccttgaatttgaaagaagatttacttcgaggtatctacgca
tacaacttcgaaaaaccatctgcaattcaacaaagagctattatacctatcatgagagga
agagatgttatcgctcaagctcaatcaggtactggtaaaacagctacgttctcaatttca
gcattacaatctatcgacacaaaagttcgagaatcacaagtcttagtcctttcacccacg
agagaattggctgttcaaatccaatctgtcatgttggctttaggtgattacatgaacgta
tcatgtcatgcttgtatcggtggaacaagtgtgggtgaagatatcagaaagttggaagct
ggtcaacaggtcgttagtggtactcccggaagagtgtttgatatgatcagaagacgaaat
ctcaggaccaaggatatcaagatgcttattctcgatgagtccgatgaattactcaacaaa
ggtttcaaagatcaaatatacgatatctaccgatatcttccccctgccactcaagtggtc
gttgtctccgctactctacctcacgatgttctcgagatgacaaccaagttcatgaccgac
cctattcgaatcttggtcaagcgtgatgagttgactttagaaggtatcaagcaattcttc
gtcgctgttgagaaggaagattggaagtttgacactttatgtgatttgtatgatacactc
actatcacgcaagccgtcatattctgtaatactcgaagaaaggttgattggctcactgag
aaaatgcgagaagccaactttaccgttagcagtatgcacggtgagatggtacaaaaagag
cgagatgctattatggcagaattcagaggcggtcaaagtcgagtacttatcaccaccgac
gtgtgggccagaggtattgatgttcaacaagtttctttggtcatcaattacgatttaccc
acatcgcgtgaaaactacttgcacagaataggtcgatcaggtcgattcggtcgaaaaggt
gttgctatcaatttcgtcactgtagaagacgttcgaattttaagagatatcgaacaatat
tattctactcaaatcgatgaaatgcccatgaacgtcactgagcttacatag
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