Kwoniella shivajii: 87954800
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Entry
87954800 CDS
T10982
Symbol
IL334_002669
Name
(RefSeq) uncharacterized protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ksh Kwoniella shivajii
Pathway
ksh03420
Nucleotide excision repair
ksh03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ksh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
87954800 (IL334_002669)
03430 Mismatch repair
87954800 (IL334_002669)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ksh03400
]
87954800 (IL334_002669)
Enzymes [BR:
ksh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
87954800 (IL334_002669)
DNA repair and recombination proteins [BR:
ksh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
87954800 (IL334_002669)
MMR (mismatch excision repair)
Other MMR factors
87954800 (IL334_002669)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
AAA_11
Motif
Other DBs
NCBI-GeneID:
87954800
NCBI-ProteinID:
XP_062790461
LinkDB
All DBs
Position
3:complement(join(1277014..1277409,1277464..1277577,1277633..1277803,1277854..1277904,1277958..1278109,1278181..1278351,1278403..1278492,1278548..1278686,1278750..1279083,1279143..1279236,1279295..1279513,1279587..1279686))
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AA seq
676 aa
AA seq
DB search
MGDHKPSSCSPPSGIPDKLKYPYLTSLNAAQLKAVTSPPEIPLQILAGPGSGKTRVLTSR
VAHLVQYHDYRPYEIVAVTFTNKASSEMKKRLQVLLGAKQADALVLGTFHATCAKYLRRY
GQLIELLNNFIIADAEDCKKIMSTLLKSRKDSLEDSRMALKEGVVLSEISKAKAKEESPD
QMAMRAAQDPGTSTNTLAIIAELYAEYEATLREANSLDFDDLLVFGLRLFRSAPRVLESC
RHILVDEFQDTNITQYELMKCFAKAHGGVSVVGDPDQSIYGWRSAEVENLNKMTNDFPGV
EAIYLEENYRSTGSILSAAHAIVSQDRARIQKNLFTSHPRSTPVTLKVFSTPVIEASFIA
WEIKRLIAYSGGTLNYGDFAILLRYNALSRVIESALQKDSIPNRIVGGHKFFERMEVKDL
LAYLQLADNPGFTPAFVRVVNTPKRSIGDKSISDLLNTAKSMKISPMELSERIIDGEPLP
AGLKAGIKKNLGSFVGAVRKLRRAAEKGSSVGDLIRLIIEKTGYEEYLRASQQDFDSRWE
NVQELISYSVIVSEEQARLSAGETSEGSFMPANSAAVEAIINRAQVEEKIKSETRLHPLF
RRQSSNASGSGRSRSRSTSVSKGKAKTVSGDDGVIEVLSSDEEDMDSKPTVTNGIGKVKE
MVTSEMVDDLTNAAEK
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atgggggatcataaaccttcctcatgctcaccaccatctggtattccagataaactaaaa
tatccatacctgacatcactcaatgcagctcaactgaaagctgtgacctcacctcctgaa
atccctcttcaaatcttagcaggtccaggatcaggtaaaacccgagtattgacttcacga
gtagctcatctcgttcaatatcatgattatcgtccgtatgaaatcgttgctgtcactttc
accaataaagcttctagcgagatgaagaagaggttacaagtactattaggagctaaacaa
gcagatgcgctggtcttaggaacttttcacgctacttgtgctaaatatctccgaagatat
ggtcaactcattgaattgctaaataactttatcatagctgatgctgaagactgtaagaaa
atcatgtcgactctcctaaaatctcgtaaagactcactagaagattcccgtatggctttg
aaagaaggagtcgttttatcagagatatcaaaagcaaaagcaaaagaggaatcaccggat
caaatggcaatgagggcagctcaagatccaggtacatccacaaatacattagctatcatc
gcagagttatatgcagaatacgaagcgactttgagagaagcaaattcgttagattttgac
gatttattggtatttggtttgagactgttcaggagtgctcctagagtgttggaatcatgt
agacatatcttagttgacgagttccaggacaccaatataactcaatatgaattgatgaaa
tgtttcgctaaagctcatggaggagtcagtgtagtgggagatccggatcaatcaatttat
ggatggagatcggctgaagtagaaaacttgaacaagatgacaaatgattttcctggagtg
gaagcgatttacttggaggagaattaccgttcaacaggatctatcctctcagctgcacac
gcgattgtttcacaagaccgggctcgtatacagaagaatctcttcacttctcatccacgc
agtacacccgtcacgctaaaagtattcagcacacctgtcatcgaagcgagtttcatcgct
tgggaaatcaaaagactgatagcgtattcaggtggaacattgaattatggggattttgct
attctactgcgatataatgcattatcgagagtcatcgaatccgctctacaaaaagatagt
ataccaaatcgtatagtcgggggacacaagttctttgaacgtatggaagtcaaggatctt
ctagcgtatctgcagctggcggataatcctgggttcacacctgcattcgtccgagttgtc
aatactcccaagcgatcaattggagacaagtccatctctgacctgcttaacaccgcaaaa
tcaatgaaaatctcacctatggagttgtcagagaggatcattgatggtgaaccacttccc
gctggattaaaagcaggaatcaagaagaatttggggagtttcgttggcgctgtcaggaaa
ctccgaagagcggcagaaaagggatcatctgttggtgatttgatacggttgatcatcgaa
aagacaggatatgaagaataccttagagcctcgcaacaggatttcgactctagatgggag
aacgtacaggaactgatctcatacagtgtcatcgtttccgaggaacaggctcgtttatcg
gctggcgaaacctctgagggtagcttcatgccagccaattctgccgctgttgaagccatc
ataaaccgtgctcaagtagaggagaagatcaagtccgagactaggttacatcctttattc
cgtcgccaatcgtccaatgcaagtggcagtggtagaagtaggagtcgatctacttcggtg
tcaaaaggaaaggctaaaactgtgagcggggatgacggagtcattgaggtcttgtcgagc
gatgaggaggatatggactccaagccaacagttaccaacggaattgggaaggtcaaagag
atggtgacgtcggagatggttgatgatctcacgaatgctgcggaaaagtga
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