KEGG   Kwoniella shivajii: 87954859
Entry
87954859          CDS       T10982                                 
Symbol
IL334_002728
Name
(RefSeq) uncharacterized protein
  KO
K20183  Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39
Organism
ksh  Kwoniella shivajii
Pathway
ksh04138  Autophagy - yeast
ksh04142  Lysosome biogenesis
ksh04145  Phagocytosis
ksh04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:ksh00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagocytosis
    87954859 (IL334_002728)
   04142 Lysosome biogenesis
    87954859 (IL334_002728)
   04138 Autophagy - yeast
    87954859 (IL334_002728)
   04148 Efferocytosis
    87954859 (IL334_002728)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ksh04131]
    87954859 (IL334_002728)
Membrane trafficking [BR:ksh04131]
 Endosome - Lysosome transport
  Tethering complex
   Hops complex
    87954859 (IL334_002728)
SSDB
Motif
Pfam: Vps39_1 zf-Vps39_C CNH Clathrin TPR_Vps41
Other DBs
NCBI-GeneID: 87954859
NCBI-ProteinID: XP_062790519
UniProt: A0ABZ1CX87
LinkDB
Position
3:complement(join(1441323..1441389,1441449..1441505,1441585..1441944,1442001..1442103,1442164..1442259,1442323..1442530,1442594..1442735,1442790..1442860,1442929..1443257,1443318..1443729,1443787..1444199,1444256..1444336,1444395..1444740,1444835..1445058,1445128..1445319,1445380..1445449))
AA seq 1056 aa
MASSSLHPLLPSLKVKVTAIHQHDDRLYVGLINGALQIYSYDTSRTTNSEDEDPVPRVEL
LRSHTLGRRQIDQIGILEESKQLIVLSDTIVTLYSLPDLPKKGSIVLSQARSAHCFASTS
YPVKGKKTDTSDGNLTKELLVVGCRKKVVVYGAGKGGLKEGWESNLPHSPRHIIFPSSPS
ISGIPETIHLLFTTQTSVLLHINPSSSANRLNVSDITTSPLPPSSSTTMTSEEGGGTGIA
MGMGALTGLGGYVGLGGKSAVPLGTRTVGGEVLLARDDLGAFVSSEGNYTRAESLQWPSA
PDALSFANPYIYSVVSVVPSSAPSSSSAIPEPTVQIHLAPTLALRKTLTLPSPSAGGLSV
SHMTSTREALTSAVPAENTSPSIKMLIVSTPTDKHLSQSDGSSIWALRSSDIGEEVDQLV
REGRVADAIGLVEAVGEDGLSPSRRLPHLKTLQAVIQIARGEYQSAMETFLIFNVNPALV
LSLFPAETISGKLHVPKEQWMELFGAVEGAKLDYTTIVEKEEGTAKGILKSVVGLGGLTK
KGSVNGLKDMASDSASIRSGKSVDKDGEKEKPPVMSGEEVVPPRAALEALMYFLSDRRQK
LAGAISITPLPKESSFPPLSSLPAVEQHNLPSLPFTELDPEQLLRMAQVIYTGLIKVYLV
ARPILVGSLCRIENWCDVEEVEELLKAQKKFGDLIDLYQGKRMHGKALKMLQELAKDEED
KLDRYPPTIRYLQKLGSSELDLILESSKWIFDEDPKMALQIFTADEPEVESLPRTEVMRF
LAEINEGACIGYLEHIINNLGEDGSDYHDKLAELYLAKVKAEEGAKADQDEREDSYDGLL
NFLNSSKQYRPYRLVSKLAADELPEARAILLGRMGKHEEALRIYVYRLKDYSAAEAYCVQ
AYNTNSDIFLLLLTIYLRPQPPTKSTPAPEPLLGPALSLVSKHSTSLPPSPVLDLLPPLV
PMQDVHAFFMRTLRDTHAKRNEARVIKSLVKGRKEELERLLLGLEGKRVRVTDQRICPQC
HKRLGQSAIAVHAPRGEVTHLHCKDPFSAKLAKSRG
NT seq 3171 nt   +upstreamnt  +downstreamnt
atggcgagctcatcattgcatcctttacttccctcgttaaaggtaaaagtcacggcaatt
catcaacatgatgatcgattgtatgtcgggcttatcaacggggcacttcaaatatactct
tatgatacttcgagaaccaccaattctgaagatgaagatccagtacccagagtcgaattg
ttgagatcacatacattaggaaggagacaaattgatcaaataggtatattggaagagtct
aaacagttgatcgttctttcagatacaattgtaaccctctattctttacctgatctaccg
aagaaagggtcgatagtgcttagtcaagcgagatcagctcattgtttcgccagtacttct
tatcctgtaaaagggaaaaagacagatacaagcgatggtaatcttacgaaagaactcttg
gtcgtgggatgtaggaagaaagtagtcgtttatggagctggaaaagggggattgaaagaa
ggctgggaatcaaacctccctcattctccacgtcacatcattttcccttcatcaccttcg
atatcaggaataccagaaacgatacatcttttgttcaccacccagacatccgtcttactt
catatcaatccatcgtcatctgcaaatcgactgaatgtatcggacatcaccacttcccca
ctcccaccttcttcctctacaactatgacgtctgaggaaggagggggcacaggaatagct
atgggtatgggagccttgactggattgggaggatacgttggtctaggagggaaatctgct
gttccattgggaacaagaaccgtgggtggagaagtattacttgcaagggacgatttggga
gctttcgtatccagtgaagggaattatacaagagcagaatcgttacaatggccaagtgca
cctgacgccctatcattcgcaaacccctatatatactctgtggtatctgtcgttccttct
tctgctccttcaagctcttcagccatccctgaacccactgttcaaatccatctcgcacca
actttggctctacgtaaaactctgactttaccatcaccatctgcaggaggtttatccgtt
agtcatatgacaagtactcgagaggccttgacatctgctgtcccagcagagaatacatcc
ccgtcaatcaagatgttgatagtgtctacaccgacggacaagcacttatctcagagtgat
ggaagttcaatttgggctttgagatcaagtgatatcggagaagaagtggaccagttggtt
agagaaggacgagtggcagatgcgattggtcttgtggaagcagtgggagaagatggactt
tcaccttcccgacgtctacctcatctgaaaacgttacaagctgtgattcagattgccaga
ggcgaataccagtcagctatggaaacattcttgatcttcaacgtcaatcctgctttggtc
ctttcattatttcctgcagaaaccatatctgggaaattgcatgtccccaaagaacaatgg
atggagctatttggcgcggtcgagggagcgaagcttgactatactacaattgtagagaag
gaggagggaactgcaaaaggaatcttgaaaagcgtggttggtttaggtggattgaccaag
aaaggaagtgtcaatggcctcaaagatatggccagtgattcagctagtataaggagcggg
aaaagtgtcgataaagatggtgaaaaggagaaaccacctgtgatgagtggtgaagaagta
gtcccacctcgagccgcattagaggctttgatgtatttcctttcggatcgtcgacaaaag
ctagcgggagcaatatcgataacgcctctgccaaaagaatcgtcctttccacctctatcg
tctttacctgctgtagagcaacataatcttccttctctaccattcactgaacttgaccct
gaacaattactccgaatggctcaagtcatctatacaggtttgatcaaagtatacctcgta
gcaagacctatactggtagggagtttatgtagaatcgaaaattggtgtgatgtcgaagag
gttgaagagttattgaaagctcaaaagaaattcggtgatttgattgatctgtatcaggga
aagagaatgcatggtaaagcactgaaaatgttacaagaattggcgaaagatgaagaagat
aaattggatcgatatccacctacaatcagatatttacaaaagcttggatcttctgaactg
gacctgattctggaatcgtcaaagtggatcttcgatgaagatcctaaaatggctttacag
atctttacagcagatgaaccagaagtagaatctcttcctcgtacggaggtgatgcgattc
cttgctgaaatcaatgaaggagcttgtatcggttatctagaacacatcatcaataattta
ggggaagatggttccgactatcatgataaactggctgaattgtatcttgctaaagtgaag
gcggaagagggagctaaggctgaccaagatgaacgagaagattcgtatgacggtttattg
aatttcttgaattcatcaaaacagtataggccttataggttggtcagcaaacttgctgca
gacgaattgccagaagcaagagcgatattattgggaagaatgggtaaacatgaagaagcg
ttaaggatttacgtgtatagattaaaagactacagcgctgcagaagcatactgtgtccaa
gcttataacacgaattccgacattttcttgcttctcttaacgatttatctccgtccacaa
ccacctactaaatccactcctgcgccagaaccattacttggtccagcgttgtcactagta
tcaaaacattcaacctctttaccaccttcaccagtcttagaccttttacctcctttagta
ccgatgcaagatgttcacgcgttcttcatgagaactctgagagatactcatgcgaagagg
aatgaagctagagtaatcaagagtctggttaaaggtagaaaagaagaattggagagattg
ttacttgggttagaaggaaagcgagtcagagttacggatcagagaatatgccctcaatgc
cacaaacgtttaggtcaatcagcaattgctgttcatgcgccaaggggtgaagtcacccat
cttcattgtaaagatccattcagtgccaagttggcgaaatcacgaggataa

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