Kwoniella shivajii: 87954879
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Entry
87954879 CDS
T10982
Symbol
IL334_002748
Name
(RefSeq) uncharacterized protein
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
ksh Kwoniella shivajii
Pathway
ksh03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ksh00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
87954879 (IL334_002748)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ksh03021
]
87954879 (IL334_002748)
03036 Chromosome and associated proteins [BR:
ksh03036
]
87954879 (IL334_002748)
Transcription machinery [BR:
ksh03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
87954879 (IL334_002748)
Coactivators
SAGA/TFTC/STAGA complex
87954879 (IL334_002748)
Chromosome and associated proteins [BR:
ksh03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
87954879 (IL334_002748)
STAGA complex
87954879 (IL334_002748)
TFTC complex
87954879 (IL334_002748)
SAGA complex
87954879 (IL334_002748)
SLIK complex
87954879 (IL334_002748)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
TFIID_NTD2
Beta-prop_EML_2
Beta-prop_TEP1_2nd
EIF3I
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_SCAP
NBCH_WD40
Beta-prop_WDR75_1st
ANAPC4_WD40
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
Beta-prop_DCAF4
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
Beta-prop_HPS5
Beta-prop_RIG_2nd
Beta-prop_SPT8
Beta-prop_WDR19_1st
Beta-prop_DCAF12
Beta-prop_EIPR1
WD_LRWD1
DUF7165
LisH
Nbas_N
WD40_like
Motif
Other DBs
NCBI-GeneID:
87954879
NCBI-ProteinID:
XP_062790539
LinkDB
All DBs
Position
3:complement(join(1491505..1491637,1491692..1492019,1492100..1492268,1492335..1492684,1492737..1492849,1492893..1493493,1493537..1493827,1493880..1493958,1494011..1494586))
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AA seq
879 aa
AA seq
DB search
MSESPAPLGGPSNHASSGTRTDANLLRQFVMEYLQSHGFDKALDMFQKGIADQGGVDGDK
DVVIAGEDDAMGEDGGRRGSTGGGREAIFRAPGPVPLESNVKRNIPQAQAVSASTMSENI
TPEFEAQAKYIIEQLQKKVGASAQGQDGEDNTTTKELKDATLNQDSLLDPSDRVEGYKSF
RRWVDGGLDLWKPELDNLSFPLFVHTFLELIEFSFLKTAREFFKQHSVHHRPLHPQDVST
LSSISTKEHVHANPFCQRILTDKYIVPLSRNANDLLLQWLSGAGLDEDWEAGLHSAAGRA
KEAIKGIVFNHISITVTNTGVPLDKITIASKSGLIASALPAAMPIEAFNTATTLKLGPPP
MTEKLKEQVARTLHDEDVLQQPNGNTSPSKPDSSLPNGHPNGNGNGDVDMTSPSQDQNPT
PSENQDRPRSPTVTVQEMKLESDRDPDLVSPEESETLPPIPAVFRIPDLKREVEAIRDKR
KMIRLGTQASDVKAGSSSTTVLPSVVAFTLFDHGESASSVEFSRDSSLMAVGSSESCIRL
WSLKGEKLKRKSVDPTDGTLVEDEGQPFRKLIGHSGPVYSLSFDPLYGSASAPSTLLSSS
QDGTVRLWSLDTYSNLVVYRGHGKDPVWDVEWGPMGVYFATASRDRTARLWSSDRVTPLR
MYTGHLSDVNCVRFHPNSLYLATGSNDSSCRLWDVQRGACVRLFMGHTDAVTTMAISPDG
KLLASAGLDSSIWLWDLGSSRPIKKMYGHRSSIESLSFSADSAVLVSGGLDSTVRCWDVK
SSGGERTVGRQTDTGIFGNAAGVSDGIRRLNGGGVDEQGSLPMGPGRGGWEDEPHTSDLL
ATWPTKRTPILKTHYTPRNLCMVAGSFIPPSNTARAVNR
NT seq
2640 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaatcaccagcacctctggggggacccagtaatcatgcttcttcaggtacaaga
accgatgccaatcttctccggcaattcgtgatggaatatcttcaatctcacgggttcgac
aaagcgcttgacatgttccaaaagggaatagccgatcaagggggagttgacggtgataaa
gatgtggtgatagccggagaagatgatgcaatgggtgaagatggtggtagaagaggttca
actggtggagggagagaagctatctttcgtgcacccggacctgttccattggaatcgaat
gtaaaaaggaatatacctcaagctcaagctgtttcagcctctacgatgtcagaaaatata
acaccggagtttgaagcgcaagcaaaatacataatagaacaattacaaaagaaagtggga
gcttctgctcaaggtcaagacggtgaagataatacgactactaaagagttgaaggatgct
actttgaaccaggattctctgttggacccttcagatagagtagaaggttataaaagcttt
agaagatgggtggatggtggattggatttatggaagcccgaattggataacctctctttc
cctcttttcgttcacactttcctcgagctcatcgagtttagctttttgaaaacggcccga
gagttcttcaaacaacactcagtacaccaccgtccacttcaccctcaagatgtatccacc
ttatcttcgatatcaacgaaggaacacgttcatgcgaatcctttttgtcaacggatactc
accgacaagtatatcgtgccgttatcaaggaacgcaaatgaccttcttttacaatggttg
agtggagcgggattagatgaagactgggaagctggattacattccgctgctggacgagcg
aaagaagccattaaagggattgtgttcaatcatatcagtataacagtcaccaacactggc
gtccctttggacaaaatcaccattgcgtccaaaagcggtcttatcgcttctgctcttcct
gcagctatgcctatagaagcattcaatactgctaccactcttaaattagggcctcctcca
atgactgagaaattaaaagaacaagtggctagaactcttcacgatgaagacgtattacaa
cagccaaatggcaacacatctccttcaaaacctgattcatcgttacctaatggtcatccc
aatggaaatggtaatggggatgtggatatgacatctccttctcaggatcaaaatcctacg
ccgtctgagaatcaagatagaccccgctcaccaactgtcactgtacaagaaatgaagctg
gaatcggatcgagatccagatctcgttagtccagaggaaagcgagacattaccaccgata
cctgctgtgttccggataccagatttgaagagagaagtggaggctatcagagataagagg
aagatgattcggctaggaactcaagcaagtgacgtgaaagcaggaagcagttctacaacc
gtattgcccagcgtggttgctttcaccttgtttgatcatggagaaagtgcatcatcggtg
gaattctcgagagactcgtctctcatggccgtaggatcgtctgaaagctgcatacggctg
tggagtctgaagggggaaaagcttaagaggaagtcggtcgatccgacagatggcacattg
gtggaagatgaagggcaacccttccgtaaattgattggtcactctggacccgtctattct
ctatctttcgatccattgtacggttcagcttctgcaccttcaacgctactatcgtcttct
caagatggtaccgtacggctgtggtctttggatacgtactcgaatctggtggtatatcgt
ggacatgggaaagatccggtatgggatgtcgaatggggtccgatgggtgtctactttgct
actgcttccagggatagaacggcgagattatggagctccgatagggtgacccccttgagg
atgtacaccgggcatctatcggatgtcaactgtgtgcgattccatccaaattcactgtat
ttggctacagggtcaaatgactcttcgtgtagattgtgggatgtacaaagaggtgcatgt
gtaaggttgttcatgggacatacagatgctgtaacgacgatggctataagtccagatggg
aaattattggctagtgcaggtttagactcgtcaatctggttatgggatttaggatcttcg
agacctataaagaagatgtatggacatcgatcgtctattgaatcattatcattttcagca
gattcagcagtattagtttcgggtggattagactcgactgttagatgttgggatgtgaag
tcttccggtggagagagaacagttggcagacagactgacacaggtatatttggtaatgcc
gctggtgttagtgatgggatcaggagattgaatggaggtggtgtagatgaacaaggtagt
ttacctatgggtccaggaagaggtggatgggaggatgaaccgcatacctccgacctgttg
gctacttggccgactaaacgtacaccgatattgaaaacccattacacgcctaggaacctc
tgtatggtagctggatctttcattcctccaagtaatacagcgagggcagtcaacagataa
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integrated database retrieval system
