Kwoniella shivajii: 87954893
Help
Entry
87954893 CDS
T10982
Symbol
IL334_002762
Name
(RefSeq) uncharacterized protein
KO
K10755
replication factor C subunit 2/4
Organism
ksh Kwoniella shivajii
Pathway
ksh03030
DNA replication
ksh03410
Base excision repair
ksh03420
Nucleotide excision repair
ksh03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ksh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
87954893 (IL334_002762)
03410 Base excision repair
87954893 (IL334_002762)
03420 Nucleotide excision repair
87954893 (IL334_002762)
03430 Mismatch repair
87954893 (IL334_002762)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ksh03032
]
87954893 (IL334_002762)
03036 Chromosome and associated proteins [BR:
ksh03036
]
87954893 (IL334_002762)
03400 DNA repair and recombination proteins [BR:
ksh03400
]
87954893 (IL334_002762)
DNA replication proteins [BR:
ksh03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
87954893 (IL334_002762)
DNA Replication Termination Factors
ELG1-RFC complex
87954893 (IL334_002762)
Chromosome and associated proteins [BR:
ksh03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
87954893 (IL334_002762)
DNA repair and recombination proteins [BR:
ksh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
87954893 (IL334_002762)
Check point factors
HRAD17(Rad24)-RFC complex
87954893 (IL334_002762)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
Rep_fac_C
DNA_pol3_delta2
Rad17
AAA_22
RCF1-5-like_lid
AAA_11
AAA_16
AAA_30
AAA_lid_RFC1
AAA_2
RuvB_N
Mg_chelatase
AAA_19
SLFN-g3_helicase
AAA_28
AAA_assoc_2
AAA_14
ResIII
DEAD
AAA_7
AAA_5
AAA_24
DUF815
Cdc6_lid
bpMoxR
nSTAND3
AAA_3
RNA_helicase
Motif
Other DBs
NCBI-GeneID:
87954893
NCBI-ProteinID:
XP_062790553
LinkDB
All DBs
Position
3:complement(join(1535149..1535313,1535384..1535562,1535633..1535753,1535829..1535949,1536059..1536211,1536402..1536524,1536719..1536752,1536842..1536887,1537008..1537086,1537272..1537351))
Genome browser
AA seq
366 aa
AA seq
DB search
MATFAPRPVGGSTMALDPKNQPWVEKYRPKTIDDVSSQEHTVAILRKALTSTNLPHMLFY
GPPGTGKTSTILALARQLFGPDLFRARVLELNASDERGISVVREKIKTFARETPRHVGTS
SDGKTYPAPPFKLIILDEADSMTQDAQSALRRIMETYSRITRFCLVCNYVTRIIEPLASR
CSKFRFRPLAHDSTQARIQMIANNEGVQAEDGVLPLILQLAGGDLRKAITYLQTAQRLHG
ALDPPTPISALSIHEISGVVPDDLITHILSVMGVDKDQGIDLVLANGGFEAIRTAVKRVG
REGWSAGQVLEQIHDALIPLPTIPALPKSLAAMAIAECDKGLCEGGDEELQLLECCLRIK
EAMSKQ
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atggcgactttcgcacctcgacctgtaggaggatctacaatggctttagatcctaaaaat
caaccttgggtagaaaaataccgaccaaagacgatcgatgatgtttcttctcaagagcat
acagtagctatcttgagaaaagcattaacgtcaaccaatttaccacatatgctattttat
ggtcctcctggaacaggtaaaactagtactatcctagcacttgcaagacaattattcgga
cctgatttgttccgagcaagagtacttgaattaaacgcttctgacgaaagaggtatatca
gtcgtaagagagaagatcaaaactttcgctagggaaacacctagacatgttggtacttca
tccgacggcaaaacatatcccgcaccaccattcaaactcatcatcttagatgaagccgat
tcaatgactcaagatgctcaatctgctttaagaagaataatggaaacgtattctaggata
accaggttttgtttggtctgtaattatgtcaccaggattatcgagccgcttgcttcgaga
tgtagtaaatttagattcagaccattggctcatgatagtacccaagccaggatacaaatg
atcgctaataatgaaggtgtacaagccgaagatggtgtcttaccactcatactgcaacta
gcaggaggtgatcttcgtaaagctataacatatcttcagactgctcaacgattacatggc
gcgttagaccctcccacacctatatcagcattgtcgatacacgagatatccggagtagtc
cccgatgatctgataacgcatattttgagcgtgatgggagtagacaaagatcaaggcata
gatctagtcttagcgaatggagggtttgaagctattcgaacggctgtaaagcgtgtcgga
agggaaggatggagtgctgggcaagtattggagcaaatacacgacgctttgattccatta
cctacgataccagctttacctaagagtttagccgcgatggcaatagcagaatgtgataaa
ggtttatgtgaaggtggagatgaagaattacaattattagaatgctgtttgagaataaag
gaagctatgagtaaacaataa
DBGET
integrated database retrieval system
