Kwoniella shivajii: 87955031
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Entry
87955031 CDS
T10982
Symbol
IL334_002900
Name
(RefSeq) uncharacterized protein
KO
K14325
RNA-binding protein with serine-rich domain 1
Organism
ksh Kwoniella shivajii
Pathway
ksh03013
Nucleocytoplasmic transport
ksh03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ksh00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
87955031 (IL334_002900)
03015 mRNA surveillance pathway
87955031 (IL334_002900)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ksh03019
]
87955031 (IL334_002900)
Messenger RNA biogenesis [BR:
ksh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
87955031 (IL334_002900)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_3
Motif
Other DBs
NCBI-GeneID:
87955031
NCBI-ProteinID:
XP_062790689
LinkDB
All DBs
Position
3:complement(join(1912886..1913512,1913605..1913717,1913853..1914150))
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AA seq
345 aa
AA seq
DB search
MSDRGRSRTPKSLTPSPRRARSYSRSPSRSRSRSGSISPRRTNGDKNGSSAKQGQSRSDG
GLRVIVVSGLSKNVMKGHLEEIFGEYGRITGIDLPTFKVSGLNRGKAAIEFETPSDAQLA
MKNMDGGQLDGSFLSVQISEHPLPAPKPISPPAVRRRRSISRSRTRSPPRRRRSPSYSRS
RSPPRRASFRRRSLSRSRSPPPPRGFRGGRDSYVPRGGGGGGYGGGRGGYGAGGRGGGGG
YSGYGGPGGPGGQRRDRSPLIVRRPGERGAPRRPSPEYKKGGRSISRSRSRSYSRSRSFS
SRSRSPPIRRRKYTPSKSRSRSRSMSIDSRSKSRSRSMRSVSPRK
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacagaggtagatcccgaacaccaaaatcattaacaccgtcaccacgtcgtgct
cgttcctattctcgttcaccttcaagatcaaggtctagatccggatcaatatcaccgagg
agaacaaacggggataagaatgggtcatcagccaaacaaggtcagagtagaagtgatggt
ggcttgagagtgatagtggtatccggcttaagtaagaatgtgatgaaaggtcatttggag
gaaatattcggtgaatatggtagaattactggaatcgatttacctacgttcaaagtttcc
ggactgaatcgtggtaaagcagctatcgaattcgaaacaccttcagacgcacaattagct
atgaagaatatggatggtggtcaattagatggatcgttcttgtctgtccaaatttccgaa
catcctttacccgctcccaaacctatatcgccacctgctgttcgacgtagaagatcaatt
tccaggtcaaggacgagatctccacctcgacgcagaagatcaccttcatactcacgatca
aggtcaccacctcgtcgagcaagtttcaggagaagatcactttctagatctcgttcaccg
cctcctccaagaggcttcagaggtggaagagattcatatgttccccgaggtggtggagga
ggtggatacggaggcggaagaggaggatatggcgctggtggacgaggtgggggtggtgga
tatagtggatatggtggacctggaggaccagggggacaaaggagagatagaagtccttta
atagttagaagaccaggagaaagaggtgcaccaaggaggcccagtccagaatataaaaaa
ggtggtagaagcatatcaagatcaagaagtaggagttattcaagatcaagaagtttctca
agtagatcaagatctcctccaataaggagaagaaaatacacaccaagtaaaagtagaagt
agaagcagaagtatgagtatcgattcgagaagtaagagtagaagtagaagtatgagaagt
gtcagtcctaggaaatga
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