Kwoniella shivajii: 87955392
Help
Entry
87955392 CDS
T10982
Symbol
IL334_003261
Name
(RefSeq) uncharacterized protein
KO
K12190
ESCRT-II complex subunit VPS36
Organism
ksh Kwoniella shivajii
Pathway
ksh04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ksh00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
87955392 (IL334_003261)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ksh04131
]
87955392 (IL334_003261)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ksh04147
]
87955392 (IL334_003261)
Membrane trafficking [BR:
ksh04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
87955392 (IL334_003261)
Exosome [BR:
ksh04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
87955392 (IL334_003261)
Exosomal proteins of colorectal cancer cells
87955392 (IL334_003261)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAP30
Vps36_ESCRT-II
Vps36-NZF-N
Zn_ribbon_RanBP
zf-Sec23_Sec24
Motif
Other DBs
NCBI-GeneID:
87955392
NCBI-ProteinID:
XP_062791046
LinkDB
All DBs
Position
4:complement(join(765035..765432,765498..765911,765992..766890,766966..767129))
Genome browser
AA seq
624 aa
AA seq
DB search
MARIQSNSSLPTGLSPDYWATWIASRPGASVSESVDRDVGEEWIGGWDGVGIYEGNNKIP
SYQAVSVHLTNHRFIIIPDIPSTSSSTSSSTSISTPMSLQSHLSHVRQTEFYAGFMRSSA
KITLSLGPQLVSQSQSQLQSESQSAAPNDLPHSDPSAAHRGNGGNAWTCNICGYVNSLSS
GRSTPNPASKCGLCGIPYGNSQSSFSSSNNNSNLPSRSSTPSINLPSSLKNPNPSTINPL
ESDVKQEGNDGLISCPACTFLNSPLLPNCEICSTALPRKAKPPIKEGTTITPSPTTGKTD
IVRLSFRRGGEKEVYKRLKAVLGDKAWERSGGVMMTTSKQGEIVEGLPRSGAGIDGILQQ
IDLNSKSQSDHISTAFADLEALMLRAGEMVRLAQSINTKLTTQQASNGIQPTEEESTMIR
TSLVQLGLAAPAVTKEMIRDEKRYHDSLAKELGELLTGRYGIKGEGLMVGNKARGVIALD
EIWGLWMRARGVSLLSPSTLISILPLIPLHTNPSINSLHLPSSLQVLHTPHYSAPSILSR
SLDHLTPSSTSSSAEDTDETQGKEKSFTIFEFASIESLPIGLAKEFMEILEKQGGLVKDA
QVGPSEGGEKWYRDIISSWPVANV
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atggctcgtatacaatccaactccagcctacctactggcctctcaccagattactgggca
acttggatcgcttcacgtccaggtgcaagtgtttccgaatctgtagatagggatgtcggg
gaagaatggattggtggatgggatggtgtaggtatatatgaagggaataacaaaatacct
tcataccaagctgtttctgtccatctaaccaatcatcgatttataatcattcctgatata
ccatcaacctcgtcatcaacgtcatcgtccacatctatatctacaccgatgtctttacaa
agccatctgtcgcatgttaggcagactgaattctacgctggattcatgagatcatcagcg
aagatcacattatctcttggtccgcaactagtatctcagtcacaatcacagctacagtca
gagtcacaatctgcagctcccaatgatcttcctcactcagaccctagtgctgctcataga
ggaaacggaggcaatgcctggacatgtaatatatgtggatatgtgaattcattgtcttca
ggaagatcaacaccgaatccagcttcgaaatgtggtttatgtggtataccttatgggaat
tcccaatcatccttttccagttcaaataataattcaaatttaccgtcaagatcaagcact
ccctccatcaatctaccatcttctttaaagaaccctaacccttcgacaatcaaccctctc
gagtcagatgttaaacaagaaggaaatgatggattgatatcctgtccagcatgtacattc
ctaaattcacctttattacctaattgtgagatatgctcaacagctcttccgagaaaagcc
aaaccacctattaaagaggggaccacgattactccaagtccgacaacaggaaagacggat
atcgtgaggctgagtttcagacggggtggtgagaaagaagtttataaaaggttgaaagct
gttctaggtgataaagcttgggaacgaagtggcggagtaatgatgaccacttcaaagcaa
ggagagatcgttgagggtttacctagatctggtgctggtatagatggcattcttcaacaa
atcgatctcaattccaaatcgcaatcggatcacatttctaccgcttttgcagatctcgaa
gcactgatgcttcgcgcaggagaaatggtccgtttagctcaatctataaatacgaaattg
actactcaacaagcttcaaatggtatacaacctacagaagaagaatctacgatgattcgt
acgagcttagtacaacttggattagcagctcctgcagtgacgaaagagatgataagggat
gaaaagagatatcatgattcattagctaaggaattaggggaactattgactggaagatat
gggattaagggagaaggtttgatggttggaaataaagcaagaggggttattgctttagat
gaaatttggggtttatggatgagagcacgaggtgtttcattgctttcaccttctacattg
atatcaattcttccactcatacctttacatacaaatccttcaatcaattcacttcatttg
ccatcatcactacaagttttacacactccacattattcagctccctcaatactttcacgt
tcattagaccatctgaccccatcttccacttcaagctcggctgaagacaccgatgaaacg
caagggaaagaaaagagttttacgattttcgaattcgcaagtatcgaatcgttacctatt
ggattagctaaggaattcatggagattttagaaaaacaaggtggtttagtgaaagatgct
caagtcggtcccagtgagggaggtgaaaagtggtatagggatataatatcctcttggcct
gttgccaatgtatag
DBGET
integrated database retrieval system
