Kwoniella shivajii: 87955440
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Entry
87955440 CDS
T10982
Symbol
IL334_003309
Name
(RefSeq) ATP-dependent RNA helicase DBP8
KO
K14778
ATP-dependent RNA helicase DDX49/DBP8 [EC:
5.6.2.7
]
Organism
ksh Kwoniella shivajii
Brite
KEGG Orthology (KO) [BR:
ksh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ksh03009
]
87955440 (IL334_003309)
Enzymes [BR:
ksh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
87955440 (IL334_003309)
Ribosome biogenesis [BR:
ksh03009
]
Eukaryotic type
90S particles
Helicases
87955440 (IL334_003309)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
87955440
NCBI-ProteinID:
XP_062791094
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All DBs
Position
4:complement(join(881780..881875,881941..882613,882673..882863,882919..883129,883197..883320,883379..883961))
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AA seq
625 aa
AA seq
DB search
MASNKLAKKFSHRQEAESVLDQNDVMKAMMAAQKGKGKEIPSGEDDDSDSDSGSGHEDND
HEEEITSDDSDSHSVNGESSSGDISTRKGIKRNRAFQSDDSDEEDIDAPRQAQNATSTSR
VNLPSRTFNSMDSRAALLQPKADTSSIFTTNPKPPSDSTFASLGLSQPLITALASINILK
PTEIQSACVGPILSGKDCIGGAKTGSGKTMAFALPIVERIARDPFGVWAVVLTPTRELAY
QLSEQFLVVGKPLGLTTATIVGGMDMMTQAQQLQSRPHIIVATPGRLCDLLRSGGSQNTL
SRVRTLVLDEADRLLTPTFAPELAYLFSQIPPKRQTCLFTATVSEAIMELANKPPALGKD
KPFVYRVESDTLTVSRLKQKYLFIPSQIRDSYLLYLLQNPPQDIDIALRAAPKKAKRKEA
ESYRHKKGRKPQRKAEEEEGESNNIPSTVIFTQRCATAHLLHLLLNQLEIPSVPLHSHLT
QPQRLLSLARFRAQEVPVLVTTDVGSRGLDIPEVAMVINWDCPRRSDDYVHRVGRTARAG
RGGVAVTVITERDVDLIKIIEDDIKVKLEELELPEEEVLEALNRVSLARRMATMEMHDSG
FGERQAINKAKAIKRMKRDAVAKAA
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atggcgagtaacaagctggccaaaaaattctctcataggcaggaagcagaatcagtcttg
gaccaaaatgatgtgatgaaagccatgatggccgctcagaaaggcaaggggaaagagata
ccttcaggtgaagacgatgattcagattcagattctggatctggacacgaggataacgat
catgaagaggagatcacgagcgacgatagtgacagtcatagtgtgaatggtgaaagctca
tctggcgacattagcacgagaaaggggattaagcgaaatcgagctttccaatcagacgac
agtgacgaggaagatattgatgcacctcgccaagctcaaaatgccacatcaacctctcgt
gtcaatctaccatcgcgaaccttcaactccatggattcaagagcagcgctactccaacct
aaagccgatacttcttctatcttcacaacaaatcccaaacctccatcagattcaacattc
gcttctctcggattatcacagcctcttataacagctttagcatcgataaatatactgaaa
cctactgaaattcaatcagcttgtgtaggacctatactgtcaggaaaagattgtatcgga
ggagccaagactggtagtggtaaaacaatggctttcgctttaccaatagtggaaagaata
gctagagatccatttggagtatgggcagtggtgttaacacccacaagagaacttgcatat
caactttcggagcagtttttggtcgtcggtaaacccctaggtttgaccacagctactata
gtaggaggtatggatatgatgactcaagcacaacaacttcaatctcgtccacatattata
gtagctacaccaggaaggctatgtgacttattgaggagtggcggtagtcaaaatactttg
agcagagtaagaacactggttcttgatgaagcagatagacttttgactcctactttcgct
ccggaattagcatatttattctctcaaatacccccaaaacgtcaaacttgcttattcaca
gcaacggtcagcgaagctatcatggaattggctaataaacctccagcacttggaaaggat
aagccattcgtgtatagagtagagtcagatactttgactgtatctcgtttaaaacagaaa
tacctctttatcccatcccaaatccgagattcatatttactttatctccttcaaaaccca
ccacaagatatcgacatagcattaagggctgccccaaaaaaggctaaacggaaagaagct
gaatcatatcgtcacaagaaaggaagaaaaccacaacgcaaagctgaagaagaggaagga
gaatcgaataatataccatcgacggttatattcactcagcgatgcgccactgcacatctt
ttacaccttctgttgaatcaactagaaataccgtccgtgccattgcattcacatcttacg
cagccacaaaggttactttcgttagctagattcagagcccaggaagttccggtactagtt
acgactgatgtcggatcaagaggtctggacataccggaagtcgccatggtgatcaattgg
gattgtcccaggagatcagacgattatgtccacagggtaggaagaaccgcgagagcggga
agaggtggtgtggcagtcactgtcataacggaaagagatgtggatttgatcaagataata
gaagatgatatcaaagttaaattggaagaactcgaactacctgaagaagaagttttggaa
gctttgaaccgggtttctttagccagaagaatggctacaatggaaatgcacgactcagga
ttcggtgaaagacaagctataaataaagcgaaagccataaagagaatgaagagagatgcg
gtcgccaaggcggcttaa
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