Kwoniella shivajii: 87955685
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Entry
87955685 CDS
T10982
Symbol
IL334_003554
Name
(RefSeq) uncharacterized protein
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
ksh Kwoniella shivajii
Brite
KEGG Orthology (KO) [BR:
ksh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ksh03016
]
87955685 (IL334_003554)
Enzymes [BR:
ksh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
87955685 (IL334_003554)
Transfer RNA biogenesis [BR:
ksh03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
87955685 (IL334_003554)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
Motif
Other DBs
NCBI-GeneID:
87955685
NCBI-ProteinID:
XP_062791335
LinkDB
All DBs
Position
4:complement(join(1556017..1558675,1558771..1559225))
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AA seq
1037 aa
AA seq
DB search
MASIRMRPNAGPSRILRRTLATSIRISDSHNQYNSQPYSESSSPAQGQVKHPKTFDFLYG
NDWKKPKVPKKLPTPPKKRPRVDPEAYKNLPPLEAPLRERKVEFSLAEGHSNDRRAYFAS
DVDGELGQDWSSIKIVEEELGLENGRIVECRRSGNTTIGLILASVSLSGRTRLLLLRSSG
EIWPISTHDVQFVMPSSLVSPQLASQCWSPELLEAWSQSESKAGLTDEDVQPSKEMLDAR
RKVAMTLRKVHRETEKMLGRLVAGSKKGGVESIWEKFAPKSRDHRASITAIEAAEFMLNP
ELNSQGEGSQVKKITIKPNTLPAYAAHSLLMRRPDLFTADQGDMWSTGKFVVRSRAERDL
IDNVQRSVDESMIPNKPDDSRDPALSSFIDKAKRAIELSRSVKDGTADQELKEKKHHLPG
WTAKDKEYISILSSPLVETRSTQTPPSLALALSIARLISPNSEEVVDRGTLAAILQDMGM
ILPWDSLELSKLTESENRSMILSSIPIGKVRGEDELLSGNELDELRNDFTSHKVFVIDDP
TASELDDGIALERLPNSDDVWVHIHIADPTRFIPPNHPLAKQASVRGSSAYLPEGNKPLF
PLEVIMKELSLGAQVEGNNGAQGTLTFSAKLNKSGQVDESKVRMGWIKKPRVVTYAAVDQ
ALGLPTSKSTRPFGGPVSRPKDDLKSTIDSDDLEDLKTLYGLAKTHRANRFSEAGLEWQI
PSANVNLLNSPSHPSPNLFDPSSLPSSPKLFSGSLGLDYKVSSSSPIKGMNASGLVAEYM
ILAGRLAASFCHSRDIPVIYRGSLAPKPLTSEAGTLDALLATRIDGTGIIDPYTMMGSGW
YRPSGFIGLSPLQHWIMGFNKVDSGYIRATSPLRRFDDILVHWQIKAHLARSAGIAGESS
KGFNRNEVTDLIKRSDEGSKRAKRTGINANKYWQSIVLQRHLNPNNSFISGGLEWEIDEN
QKVDLREELIAKVIGSTESVPSISGEQTPVIIESLGVQAKMSHQVLSSDWNIGQEVKVKM
DEVVAWPNPHINVRLIK
NT seq
3114 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcaatccggatgagaccaaatgccggtccttctcggatcttgcgacggacacta
gcaacgtcaatccgaatatcagacagtcacaatcaatataattctcaaccatactccgaa
tcctcttctcctgctcaaggtcaagtgaaacacccgaaaacatttgatttcctctacgga
aacgattggaagaaacccaaagtacccaagaagctacctactccacctaagaaacgacca
agagtcgatcccgaagcatacaagaatcttccccctttagaagcaccattgagagagaga
aaagtggaattcagtttggcagaaggtcatagtaatgatagaagagcttatttcgcaagt
gatgtagatggcgaattgggtcaagattggtcatctattaagattgtcgaggaagaatta
ggtctggaaaatggtcgtatagttgaatgtcgaaggtctggtaataccaccattggacta
atattagcatcagtatcgttgtcaggcagaacacgattattgttactccggtcaagtggg
gagatatggccaatatcaacacatgatgtccaattcgttatgccgtcttcattagtatcg
cctcaattagcatcgcaatgttggtcgcctgaattactcgaagcatggtctcagagcgaa
tcgaaagctggactgaccgatgaagacgtacagccaagtaaggaaatgttggatgccaga
agaaaagtagctatgacattaaggaaagttcacagagaaactgaaaagatgttgggaagg
ttagttgctggatcgaaaaaaggtggtgtagaatcaatatgggaaaaattcgctcctaaa
tcaagagatcacagagcgagtataacggctattgaagctgcggaattcatgctcaatcct
gaattgaactctcaaggtgaagggagtcaagtaaagaagataacgatcaaacccaataca
ttaccagcttacgcagctcattcgttgttgatgagacgtccggatctatttacagcagat
caaggtgatatgtggtccactggaaagttcgtcgtcagatcaagagctgaaagagatctg
atcgataacgttcaaagaagtgtagatgaatctatgattcccaataaaccagatgacagt
cgagatccagctttatcatctttcatcgacaaagcgaaaagagctatcgaactttcaaga
tctgtcaaagatggaaccgctgaccaagaactgaaagagaagaaacaccatttaccggga
tggacagctaaagataaagagtacatatcgatcttgtcttcacctttagtcgaaactcgt
tccacacagacaccaccctcacttgctttggcgttatcgatcgctcgactgatatcacct
aattctgaggaagtagtcgatagaggcacattagccgcaatattacaagacatggggatg
atcttaccttgggatagtttagaattatcaaaattgactgaaagtgagaaccgatcgatg
atattgtcatccatacccattggtaaagttagaggcgaagatgaactcttgagtgggaat
gagctggatgaattacgaaatgacttcacttcccacaaggttttcgtcatcgacgatcct
accgcatcagaactagacgatggaatcgctttggaaagattacctaactcagatgacgtc
tgggtacatatacatattgctgatccgaccagattcatcccaccgaatcatcctctagcc
aaacaagcttcagtgcgaggaagctcagcttatctacctgaaggtaataaaccactgttt
cctttagaagtgataatgaaggaactatctcttggtgctcaagtggaaggaaataatggt
gctcaaggaactctgacgttctcagctaaattgaacaagtctggacaagtggatgaatcg
aaagtcagaatgggatggatcaaaaaacctagagtagtcacatatgctgctgtagatcaa
gctttgggtttacccacatcaaaatcaacacgaccttttggtggtccagtctcacgtccc
aaagatgatctgaaatccacaatcgatagtgatgatctagaagatttgaaaacactatat
ggacttgccaaaacccaccgagcaaatagattctcagaagcaggtttggaatggcaaata
ccgtctgcaaacgtaaatctactcaattcgccctctcatccttcgccaaacctttttgat
ccatcttcactcccttcttcgcctaaattgttttccggttctcttggattagactacaaa
gtttcatcgtcgtctccgatcaaagggatgaacgcttctggactagtagccgaatatatg
attttagctggtagactggcagcttcattctgtcattccagggacatccctgttatatat
agaggatctttagctcccaagccgttaacatcggaagccgggacattagatgctctgctg
gcaacaagaattgatggcactggaataatcgatccttataccatgatgggatcaggctgg
tatagaccttctggatttatcggtttatctcctttacaacattggattatgggatttaac
aaggttgactcgggatatatcagagcgacatcgccattaagaaggttcgacgatatactc
gtacattggcagataaaagctcatctagctagatcagctggtattgcaggtgaatcatcg
aaaggatttaacagaaatgaagtgacagatttaattaaaagatcggatgaaggtagtaaa
agagctaagagaacagggataaacgcaaataaatactggcaatcgattgttcttcaacgt
catcttaacccaaacaattcgtttatatctggaggattagaatgggagattgatgaaaat
caaaaagtagatctgagagaagagttgattgccaaagtcataggatcgacagaatctgta
ccttctataagcggtgaacagactcctgtgatcatcgaatcgctaggtgttcaagctaaa
atgtctcatcaagtcttgagtagtgattggaacataggacaagaagttaaagtgaaaatg
gacgaagtcgtagcttggcccaatcctcatatcaatgtcagactgattaaatag
DBGET
integrated database retrieval system
