Kwoniella shivajii: 87955840
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Entry
87955840 CDS
T10982
Symbol
IL334_003709
Name
(RefSeq) uncharacterized protein
KO
K10756
replication factor C subunit 3/5
Organism
ksh Kwoniella shivajii
Pathway
ksh03030
DNA replication
ksh03410
Base excision repair
ksh03420
Nucleotide excision repair
ksh03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ksh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
87955840 (IL334_003709)
03410 Base excision repair
87955840 (IL334_003709)
03420 Nucleotide excision repair
87955840 (IL334_003709)
03430 Mismatch repair
87955840 (IL334_003709)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ksh03032
]
87955840 (IL334_003709)
03036 Chromosome and associated proteins [BR:
ksh03036
]
87955840 (IL334_003709)
03400 DNA repair and recombination proteins [BR:
ksh03400
]
87955840 (IL334_003709)
DNA replication proteins [BR:
ksh03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
87955840 (IL334_003709)
DNA Replication Termination Factors
ELG1-RFC complex
87955840 (IL334_003709)
Chromosome and associated proteins [BR:
ksh03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
87955840 (IL334_003709)
DNA repair and recombination proteins [BR:
ksh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
87955840 (IL334_003709)
Check point factors
HRAD17(Rad24)-RFC complex
87955840 (IL334_003709)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
AAA_14
AAA_11
DUF815
AAA_16
AAA_assoc_2
RuvB_N
AAA_22
AAA_5
RCF1-5-like_lid
AAA_30
AAA_lid_RFC1
nSTAND_NTPase5
AAA_19
DEAD
AAA_3
AAA_24
AAA_18
AAA_28
ATPase_2
ResIII
nSTAND3
bpMoxR
Mg_chelatase
GerT_N
Fe-S_biosyn
AAA_7
AAA_25
Viral_helicase1
RNA_helicase
TIP49
Motif
Other DBs
NCBI-GeneID:
87955840
NCBI-ProteinID:
XP_062791486
UniProt:
A0ABZ1CYB1
LinkDB
All DBs
Position
4:complement(join(1947583..1947679,1947768..1947900,1948004..1948133,1948201..1948282,1948370..1948529,1948602..1948675,1948789..1948945,1949055..1949111,1949218..1949282,1949481..1949671))
Genome browser
AA seq
381 aa
AA seq
DB search
MSEPMQIDQPVTTAAAAAATKPANAMAALMANAKGKSKEADGDDTKVLSDAEIKAFNDRE
GLPWVEKYRPHSLDEVVSHKDITSTIEKFIEAGRLPHLLLYGPPGTGKTSTVLALARRLY
GPPYKKHILELNASDDRGIDVVREQIKNFAMTKVLFSKGFKLVILDEADMMTQAAQSALR
RVIETHTKNVRFCILCNYVNKITPAIQSRCTRFRFSPLPEKEVQRKVDEVVEKEGVNITD
DGKDALLKLSRGDMRRALNVLQACHAAYDVVDETAVYNCTGNPHPKDIERVVQSMMSDEF
GTSYSLITSLKIEKGLALQDLISGAYEFLDTVELPKQSRIYLLDHLGSTEHRLSVGGSEK
MQLTALLGAFKIAVELSQKKI
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaacccatgcagatcgaccaacctgtcacgacggcagcagcagcagcagcgacc
aaaccggcaaatgcaatggcagcgttgatggcaaatgcaaaagggaaatcaaaagaagca
gacggagacgatacgaaggtattaagtgatgctgagatcaaagctttcaatgatagagaa
ggattaccatgggtagagaaatatagacctcattcattggatgaagtcgtttctcataaa
gatataacaagtactatcgaaaaattcattgaagctggtagattacctcatttactgtta
tacggaccaccaggaaccggtaaaacatcaacagtattggctttagctagacgtctatat
ggtccaccatacaagaaacacatattagaattaaacgcttcggatgatagaggtatcgat
gttgttagagaacaaatcaaaaacttcgccatgacaaaagttctgttctcaaaaggtttc
aaactagtcattcttgatgaagccgatatgatgactcaagctgctcaatctgcattgaga
agagttattgagacacatactaagaatgtccgattttgtattctgtgtaattacgtcaac
aaaatcacacctgctatccaatcgcgttgtacgagattcaggttctcaccattaccggag
aaggaagttcagaggaaagttgatgaagtcgtggagaaagaaggagtgaatatcacggac
gatggaaaagacgctcttttgaaactatcaagaggtgacatgcgcagggcattgaatgtg
ttacaggcatgccacgcagcgtacgatgtagtggacgaaactgcagtttacaattgtacg
ggtaatccacaccccaaagacattgaaagagtagtccaaagtatgatgtctgatgaattc
ggaacgagttattcgctcataacatcacttaaaatagaaaaaggtctggcattacaagat
ctcataagtggagcatatgagtttctcgacactgtagaattaccaaaacaaagtagaata
taccttttagatcatttaggaagtacagaacatcgattatcagtgggtggatccgaaaaa
atgcagttgacagctctgttgggagcgttcaaaatcgccgttgaactgtcacaaaagaaa
atataa
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