KEGG   Kwoniella shivajii: 87955864
Entry
87955864          CDS       T10982                                 
Symbol
IL334_003733
Name
(RefSeq) uncharacterized protein
  KO
K11097  small nuclear ribonucleoprotein E
Organism
ksh  Kwoniella shivajii
Pathway
ksh03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ksh00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    87955864 (IL334_003733)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ksh03019]
    87955864 (IL334_003733)
   03041 Spliceosome [BR:ksh03041]
    87955864 (IL334_003733)
   03032 DNA replication proteins [BR:ksh03032]
    87955864 (IL334_003733)
Messenger RNA biogenesis [BR:ksh03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    U7-dependent histone pre-mRNA processing factors
     87955864 (IL334_003733)
Spliceosome [BR:ksh03041]
 Complex A
  U1 snRNP components
   Sm proteins
    87955864 (IL334_003733)
  U2 snRNP components
    87955864 (IL334_003733)
 Complex B
  U1 snRNP components
    87955864 (IL334_003733)
  U4/U6.U5 tri-snRNP components
    87955864 (IL334_003733)
 Complex C
  U2 snRNP components
    87955864 (IL334_003733)
DNA replication proteins [BR:ksh03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     87955864 (IL334_003733)
SSDB
Motif
Pfam: LSM Hfq
Other DBs
NCBI-GeneID: 87955864
NCBI-ProteinID: XP_062791510
UniProt: A0ABZ1D032
LinkDB
Position
4:complement(join(2027782..2027837,2028026..2028101,2028188..2028211,2028314..2028376,2028434..2028466,2028534..2028560))
AA seq 92 aa
MSGRKVMVQPINIIFAHLQKHTRTTIWLYDNNDFRIEAYIIGFDEFMNLVLDDAEEVYDC
AAKPGKEVPPRKELGRILLKGDNITLIQPTQG
NT seq 279 nt   +upstreamnt  +downstreamnt
atgtccggtagaaaagtgatggttcagcccatcaacattatatttgctcatcttcaaaaa
cacactcgaactactatctggttgtacgataacaatgacttcaggattgaggcatatatc
atcggtttcgacgagttcatgaatctagtcctcgacgatgcagaagaggtgtatgactgt
gctgccaagcctgggaaggaagtgccgccacgtaaagaattgggtcgtatcctcctcaaa
ggcgataatataaccctaatccaacctacacaaggataa

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