Kwoniella shivajii: 87955917
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Entry
87955917 CDS
T10982
Symbol
IL334_003786
Name
(RefSeq) uncharacterized protein
KO
K14407
cleavage stimulation factor subunit 2
Organism
ksh Kwoniella shivajii
Pathway
ksh03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ksh00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
87955917 (IL334_003786)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ksh03019
]
87955917 (IL334_003786)
Messenger RNA biogenesis [BR:
ksh03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
87955917 (IL334_003786)
U7-dependent histone pre-mRNA processing factors
87955917 (IL334_003786)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CSTF2_hinge
RRM_1
CSTF_C
RRM_7
RRM_10
RRM_RdRP1_2
Motif
Other DBs
NCBI-GeneID:
87955917
NCBI-ProteinID:
XP_062791563
LinkDB
All DBs
Position
5:complement(join(70433..70462,70524..70607,70676..71005,71095..71214,71326..71762,71866..71924,72011..72073,72198..72213,72342..72375))
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AA seq
390 aa
AA seq
DB search
MAPGHASKTIFVANIPYDVSEEQLANTFAEAGPVQNVEIKFDPQTGRSKGYAFVQFWDEG
TALSAVRNLQEVPVNGRNLRVELSTDEPGPRRGGRGSRGGVPGHPGGPVGGPPGGAGGGG
GSGGGAPPGAGGFRPPIHEDTPPRGFDQGYPPRDPIPTVVRIDLAAVPDGTPLPPGQNPT
DSISKTLAAVSPGQMQDVMASMKSLITTNPEQARQLLSSKPQLAYALFQAMLLMNIVDPS
VLHRIQPLPPVAPPPAAYAPPPTQNAYPSYPPASSVPPPANYPPYPPANAVPPPSGAGYR
PPPTQGYNAPPPAGYGAPPAGYSTPAPPAPVGGMSSLPPSAQQALATLPKDQQDMLLQVL
QLTPDQINALDATQKASIMQLRQQFLGAAA
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atggctcctggtcatgcgagtaagacgattttcgtcgcaaacatcccttatgatgtatca
gaggaacaactggcaaatacctttgcagaagctggaccagtgcaaaacgtagagatcaaa
ttcgaccctcaaacaggtcgttccaaaggatatgctttcgtccaattctgggacgaaggt
acggctctttcagcagttcggaatctccaagaggtacctgtgaacggacgtaatctaaga
gtagaattatctacggatgagcctggacctagaagaggtggaagaggaagtcgtggtgga
gtacctggacatccaggtggtcctgtcggtggacctccaggcggagcaggaggaggcggt
ggtagtggaggaggggcacctcccggtgctggtggatttagaccaccgatacatgaagat
acacctccaagaggatttgatcagggttatccaccaagggatccaattccaacagtcgta
agaatagacttagctgctgttccagacggaacacctttacctccaggtcaaaatccaacg
gatagtataagtaaaacattagctgctgttagcccaggccaaatgcaagatgtaatggct
agtatgaaatcactcatcaccaccaacccagaacaagcacgacaactactcagttcaaaa
ccacaacttgcatacgccttattccaagctatgctattgatgaatatcgttgacccctcc
gttcttcatcgtatacaacctttaccacctgttgctccgccacctgcagcgtacgctcca
ccacccactcaaaacgcctatccttcttaccctccagcctcatccgtaccgcctccagcc
aactaccctccttatccacctgcgaatgctgttcctccaccttcgggagcaggatatcga
ccacctccaactcaaggttacaacgcccctcctccagcaggatatggtgctccaccagca
ggatacagcacacctgctcctcctgctcctgtaggaggtatgtcgtctctgcctcctagt
gcccagcaggcattggctacgttaccgaaggatcaacaggatatgcttcttcaagtactt
cagctaacaccagatcagatcaacgctctggatgctacgcagaaagcctcaataatgcaa
cttagacaacagttccttggtgcagcagcatag
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